Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5893 | 17902;17903;17904 | chr2:178730988;178730987;178730986 | chr2:179595715;179595714;179595713 |
N2AB | 5576 | 16951;16952;16953 | chr2:178730988;178730987;178730986 | chr2:179595715;179595714;179595713 |
N2A | 4649 | 14170;14171;14172 | chr2:178730988;178730987;178730986 | chr2:179595715;179595714;179595713 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.839 | 0.853 | 0.854161070543 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9966 | likely_pathogenic | 0.9982 | pathogenic | -2.229 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Y/C | 0.9632 | likely_pathogenic | 0.9825 | pathogenic | -1.643 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.625331473 | None | None | N |
Y/D | 0.9971 | likely_pathogenic | 0.9988 | pathogenic | -2.766 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.625331473 | None | None | N |
Y/E | 0.9987 | likely_pathogenic | 0.9994 | pathogenic | -2.515 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/F | 0.3218 | likely_benign | 0.3603 | ambiguous | -0.726 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | D | 0.577839519 | None | None | N |
Y/G | 0.9919 | likely_pathogenic | 0.9958 | pathogenic | -2.687 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/H | 0.9866 | likely_pathogenic | 0.9915 | pathogenic | -1.946 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.625129669 | None | None | N |
Y/I | 0.9346 | likely_pathogenic | 0.9472 | pathogenic | -0.718 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
Y/K | 0.999 | likely_pathogenic | 0.9995 | pathogenic | -1.856 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Y/L | 0.9128 | likely_pathogenic | 0.938 | pathogenic | -0.718 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
Y/M | 0.9733 | likely_pathogenic | 0.983 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
Y/N | 0.984 | likely_pathogenic | 0.9913 | pathogenic | -2.774 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.625331473 | None | None | N |
Y/P | 0.9993 | likely_pathogenic | 0.9996 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/Q | 0.999 | likely_pathogenic | 0.9995 | pathogenic | -2.315 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Y/R | 0.9971 | likely_pathogenic | 0.9984 | pathogenic | -2.13 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Y/S | 0.9945 | likely_pathogenic | 0.997 | pathogenic | -3.125 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | D | 0.625331473 | None | None | N |
Y/T | 0.9965 | likely_pathogenic | 0.9981 | pathogenic | -2.724 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/V | 0.9125 | likely_pathogenic | 0.9305 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
Y/W | 0.8882 | likely_pathogenic | 0.9018 | pathogenic | -0.085 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.