Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5897 | 17914;17915;17916 | chr2:178730976;178730975;178730974 | chr2:179595703;179595702;179595701 |
N2AB | 5580 | 16963;16964;16965 | chr2:178730976;178730975;178730974 | chr2:179595703;179595702;179595701 |
N2A | 4653 | 14182;14183;14184 | chr2:178730976;178730975;178730974 | chr2:179595703;179595702;179595701 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs2080377213 | None | 0.997 | N | 0.626 | 0.469 | 0.622146358133 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07555E-04 | 0 |
V/L | rs2080377213 | None | 0.997 | N | 0.626 | 0.469 | 0.622146358133 | gnomAD-4.0.0 | 6.57938E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07555E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7379 | likely_pathogenic | 0.7202 | pathogenic | -2.407 | Highly Destabilizing | 0.999 | D | 0.598 | neutral | N | 0.412626347 | None | None | N |
V/C | 0.9669 | likely_pathogenic | 0.9644 | pathogenic | -2.15 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/D | 0.9959 | likely_pathogenic | 0.9966 | pathogenic | -3.157 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.529483207 | None | None | N |
V/E | 0.9882 | likely_pathogenic | 0.9904 | pathogenic | -2.888 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/F | 0.8711 | likely_pathogenic | 0.8501 | pathogenic | -1.278 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.529229717 | None | None | N |
V/G | 0.8202 | likely_pathogenic | 0.8172 | pathogenic | -2.943 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | N | 0.494996217 | None | None | N |
V/H | 0.9978 | likely_pathogenic | 0.9981 | pathogenic | -2.586 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/I | 0.1411 | likely_benign | 0.1384 | benign | -0.864 | Destabilizing | 0.997 | D | 0.55 | neutral | D | 0.527733869 | None | None | N |
V/K | 0.993 | likely_pathogenic | 0.9945 | pathogenic | -1.731 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/L | 0.7054 | likely_pathogenic | 0.7129 | pathogenic | -0.864 | Destabilizing | 0.997 | D | 0.626 | neutral | N | 0.501464224 | None | None | N |
V/M | 0.7282 | likely_pathogenic | 0.7298 | pathogenic | -1.365 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/N | 0.9889 | likely_pathogenic | 0.9903 | pathogenic | -2.259 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/P | 0.9976 | likely_pathogenic | 0.9976 | pathogenic | -1.359 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/Q | 0.9898 | likely_pathogenic | 0.9911 | pathogenic | -2.007 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/R | 0.9866 | likely_pathogenic | 0.9881 | pathogenic | -1.724 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/S | 0.9438 | likely_pathogenic | 0.9447 | pathogenic | -2.804 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/T | 0.8602 | likely_pathogenic | 0.8706 | pathogenic | -2.39 | Highly Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
V/W | 0.9983 | likely_pathogenic | 0.9983 | pathogenic | -1.715 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
V/Y | 0.987 | likely_pathogenic | 0.986 | pathogenic | -1.455 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.