Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5898 | 17917;17918;17919 | chr2:178730973;178730972;178730971 | chr2:179595700;179595699;179595698 |
N2AB | 5581 | 16966;16967;16968 | chr2:178730973;178730972;178730971 | chr2:179595700;179595699;179595698 |
N2A | 4654 | 14185;14186;14187 | chr2:178730973;178730972;178730971 | chr2:179595700;179595699;179595698 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs1462892188 | -0.102 | 0.425 | N | 0.333 | 0.184 | 0.151104730317 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.282 | likely_benign | 0.2577 | benign | -0.326 | Destabilizing | 0.176 | N | 0.393 | neutral | None | None | None | None | N |
Q/C | 0.6003 | likely_pathogenic | 0.5543 | ambiguous | 0.02 | Stabilizing | 0.995 | D | 0.552 | neutral | None | None | None | None | N |
Q/D | 0.558 | ambiguous | 0.5279 | ambiguous | -1.134 | Destabilizing | 0.495 | N | 0.286 | neutral | None | None | None | None | N |
Q/E | 0.0962 | likely_benign | 0.0945 | benign | -1.077 | Destabilizing | 0.425 | N | 0.359 | neutral | N | 0.451729027 | None | None | N |
Q/F | 0.6916 | likely_pathogenic | 0.6437 | pathogenic | -0.369 | Destabilizing | 0.944 | D | 0.586 | neutral | None | None | None | None | N |
Q/G | 0.3485 | ambiguous | 0.3336 | benign | -0.625 | Destabilizing | 0.329 | N | 0.543 | neutral | None | None | None | None | N |
Q/H | 0.2381 | likely_benign | 0.2109 | benign | -0.781 | Destabilizing | 0.006 | N | 0.217 | neutral | N | 0.49734946 | None | None | N |
Q/I | 0.421 | ambiguous | 0.3761 | ambiguous | 0.407 | Stabilizing | 0.944 | D | 0.573 | neutral | None | None | None | None | N |
Q/K | 0.1114 | likely_benign | 0.1038 | benign | -0.138 | Destabilizing | 0.425 | N | 0.333 | neutral | N | 0.444821697 | None | None | N |
Q/L | 0.1814 | likely_benign | 0.1536 | benign | 0.407 | Stabilizing | 0.642 | D | 0.503 | neutral | N | 0.496135952 | None | None | N |
Q/M | 0.3833 | ambiguous | 0.3481 | ambiguous | 0.908 | Stabilizing | 0.981 | D | 0.476 | neutral | None | None | None | None | N |
Q/N | 0.4078 | ambiguous | 0.3738 | ambiguous | -0.686 | Destabilizing | 0.495 | N | 0.272 | neutral | None | None | None | None | N |
Q/P | 0.8871 | likely_pathogenic | 0.8876 | pathogenic | 0.194 | Stabilizing | 0.784 | D | 0.498 | neutral | D | 0.522034474 | None | None | N |
Q/R | 0.1119 | likely_benign | 0.1086 | benign | -0.048 | Destabilizing | 0.642 | D | 0.305 | neutral | N | 0.455270764 | None | None | N |
Q/S | 0.3013 | likely_benign | 0.2678 | benign | -0.677 | Destabilizing | 0.004 | N | 0.109 | neutral | None | None | None | None | N |
Q/T | 0.2068 | likely_benign | 0.1893 | benign | -0.45 | Destabilizing | 0.329 | N | 0.433 | neutral | None | None | None | None | N |
Q/V | 0.2888 | likely_benign | 0.2608 | benign | 0.194 | Stabilizing | 0.704 | D | 0.533 | neutral | None | None | None | None | N |
Q/W | 0.5215 | ambiguous | 0.4709 | ambiguous | -0.338 | Destabilizing | 0.995 | D | 0.556 | neutral | None | None | None | None | N |
Q/Y | 0.4979 | ambiguous | 0.4571 | ambiguous | -0.006 | Destabilizing | 0.893 | D | 0.5 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.