Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5900 | 17923;17924;17925 | chr2:178730967;178730966;178730965 | chr2:179595694;179595693;179595692 |
N2AB | 5583 | 16972;16973;16974 | chr2:178730967;178730966;178730965 | chr2:179595694;179595693;179595692 |
N2A | 4656 | 14191;14192;14193 | chr2:178730967;178730966;178730965 | chr2:179595694;179595693;179595692 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 1.0 | N | 0.718 | 0.512 | 0.78712903431 | gnomAD-4.0.0 | 6.00162E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1691 | likely_benign | 0.1996 | benign | -0.048 | Destabilizing | 0.999 | D | 0.565 | neutral | N | 0.479897063 | None | None | I |
D/C | 0.7157 | likely_pathogenic | 0.7559 | pathogenic | 0.176 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
D/E | 0.1567 | likely_benign | 0.1946 | benign | -0.271 | Destabilizing | 0.767 | D | 0.37 | neutral | N | 0.454651902 | None | None | I |
D/F | 0.6611 | likely_pathogenic | 0.7196 | pathogenic | -0.228 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
D/G | 0.2148 | likely_benign | 0.2448 | benign | -0.173 | Destabilizing | 0.998 | D | 0.579 | neutral | N | 0.498637539 | None | None | I |
D/H | 0.3421 | ambiguous | 0.3899 | ambiguous | 0.093 | Stabilizing | 1.0 | D | 0.665 | neutral | D | 0.530403241 | None | None | I |
D/I | 0.3744 | ambiguous | 0.428 | ambiguous | 0.213 | Stabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
D/K | 0.4235 | ambiguous | 0.481 | ambiguous | 0.539 | Stabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | I |
D/L | 0.4321 | ambiguous | 0.4845 | ambiguous | 0.213 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
D/M | 0.6277 | likely_pathogenic | 0.6841 | pathogenic | 0.246 | Stabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
D/N | 0.1182 | likely_benign | 0.1308 | benign | 0.385 | Stabilizing | 0.999 | D | 0.637 | neutral | N | 0.513990994 | None | None | I |
D/P | 0.6099 | likely_pathogenic | 0.663 | pathogenic | 0.146 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
D/Q | 0.3929 | ambiguous | 0.4593 | ambiguous | 0.37 | Stabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | I |
D/R | 0.4542 | ambiguous | 0.517 | ambiguous | 0.624 | Stabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | I |
D/S | 0.138 | likely_benign | 0.1547 | benign | 0.294 | Stabilizing | 0.997 | D | 0.572 | neutral | None | None | None | None | I |
D/T | 0.2468 | likely_benign | 0.2827 | benign | 0.388 | Stabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | I |
D/V | 0.2226 | likely_benign | 0.2614 | benign | 0.146 | Stabilizing | 0.999 | D | 0.693 | prob.neutral | D | 0.525554782 | None | None | I |
D/W | 0.914 | likely_pathogenic | 0.9338 | pathogenic | -0.195 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
D/Y | 0.3122 | likely_benign | 0.3553 | ambiguous | -0.005 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.494277612 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.