Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5905 | 17938;17939;17940 | chr2:178730952;178730951;178730950 | chr2:179595679;179595678;179595677 |
N2AB | 5588 | 16987;16988;16989 | chr2:178730952;178730951;178730950 | chr2:179595679;179595678;179595677 |
N2A | 4661 | 14206;14207;14208 | chr2:178730952;178730951;178730950 | chr2:179595679;179595678;179595677 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs756323124 | -0.306 | 0.722 | N | 0.467 | 0.18 | 0.233150807113 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0911 | likely_benign | 0.0976 | benign | -0.589 | Destabilizing | 0.415 | N | 0.457 | neutral | None | None | None | None | N |
S/C | 0.1407 | likely_benign | 0.1432 | benign | -0.443 | Destabilizing | 0.995 | D | 0.643 | neutral | D | 0.524386963 | None | None | N |
S/D | 0.4289 | ambiguous | 0.4488 | ambiguous | -0.195 | Destabilizing | 0.775 | D | 0.441 | neutral | None | None | None | None | N |
S/E | 0.4763 | ambiguous | 0.5038 | ambiguous | -0.193 | Destabilizing | 0.775 | D | 0.438 | neutral | None | None | None | None | N |
S/F | 0.1473 | likely_benign | 0.1655 | benign | -0.716 | Destabilizing | 0.961 | D | 0.699 | prob.neutral | None | None | None | None | N |
S/G | 0.1327 | likely_benign | 0.1318 | benign | -0.847 | Destabilizing | 0.008 | N | 0.228 | neutral | N | 0.505522239 | None | None | N |
S/H | 0.2878 | likely_benign | 0.2757 | benign | -1.311 | Destabilizing | 0.996 | D | 0.633 | neutral | None | None | None | None | N |
S/I | 0.1256 | likely_benign | 0.1314 | benign | -0.012 | Destabilizing | 0.901 | D | 0.687 | prob.neutral | N | 0.505775729 | None | None | N |
S/K | 0.5604 | ambiguous | 0.5596 | ambiguous | -0.749 | Destabilizing | 0.775 | D | 0.432 | neutral | None | None | None | None | N |
S/L | 0.1027 | likely_benign | 0.1101 | benign | -0.012 | Destabilizing | 0.633 | D | 0.577 | neutral | None | None | None | None | N |
S/M | 0.2208 | likely_benign | 0.2212 | benign | 0.107 | Stabilizing | 0.989 | D | 0.632 | neutral | None | None | None | None | N |
S/N | 0.1492 | likely_benign | 0.1457 | benign | -0.684 | Destabilizing | 0.722 | D | 0.467 | neutral | N | 0.491190193 | None | None | N |
S/P | 0.8076 | likely_pathogenic | 0.8678 | pathogenic | -0.169 | Destabilizing | 0.961 | D | 0.655 | neutral | None | None | None | None | N |
S/Q | 0.4323 | ambiguous | 0.4222 | ambiguous | -0.773 | Destabilizing | 0.961 | D | 0.499 | neutral | None | None | None | None | N |
S/R | 0.4003 | ambiguous | 0.3928 | ambiguous | -0.666 | Destabilizing | 0.901 | D | 0.649 | neutral | N | 0.513396348 | None | None | N |
S/T | 0.0749 | likely_benign | 0.0773 | benign | -0.658 | Destabilizing | 0.008 | N | 0.315 | neutral | N | 0.500405621 | None | None | N |
S/V | 0.1418 | likely_benign | 0.1468 | benign | -0.169 | Destabilizing | 0.858 | D | 0.611 | neutral | None | None | None | None | N |
S/W | 0.3228 | likely_benign | 0.36 | ambiguous | -0.744 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
S/Y | 0.1664 | likely_benign | 0.1863 | benign | -0.47 | Destabilizing | 0.987 | D | 0.698 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.