Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5906 | 17941;17942;17943 | chr2:178730949;178730948;178730947 | chr2:179595676;179595675;179595674 |
N2AB | 5589 | 16990;16991;16992 | chr2:178730949;178730948;178730947 | chr2:179595676;179595675;179595674 |
N2A | 4662 | 14209;14210;14211 | chr2:178730949;178730948;178730947 | chr2:179595676;179595675;179595674 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/F | rs1239818599 | -1.215 | 0.997 | N | 0.819 | 0.473 | 0.832531937271 | gnomAD-2.1.1 | 8.15E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.38E-05 | None | 0 | 8.99E-06 | 0 |
C/F | rs1239818599 | -1.215 | 0.997 | N | 0.819 | 0.473 | 0.832531937271 | gnomAD-4.0.0 | 2.74728E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70626E-06 | 1.1731E-05 | 0 |
C/S | None | None | 0.99 | N | 0.759 | 0.567 | 0.677216412824 | gnomAD-4.0.0 | 1.60327E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88191E-06 | 0 | 0 |
C/Y | rs1239818599 | None | 0.994 | N | 0.821 | 0.444 | 0.798155654027 | gnomAD-4.0.0 | 6.86819E-07 | None | None | None | None | N | None | 3.0012E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4581 | ambiguous | 0.529 | ambiguous | -1.768 | Destabilizing | 0.982 | D | 0.646 | neutral | None | None | None | None | N |
C/D | 0.834 | likely_pathogenic | 0.8846 | pathogenic | -0.214 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
C/E | 0.9142 | likely_pathogenic | 0.9371 | pathogenic | -0.076 | Destabilizing | 0.996 | D | 0.841 | deleterious | None | None | None | None | N |
C/F | 0.4667 | ambiguous | 0.4867 | ambiguous | -1.088 | Destabilizing | 0.997 | D | 0.819 | deleterious | N | 0.483326153 | None | None | N |
C/G | 0.21 | likely_benign | 0.2468 | benign | -2.101 | Highly Destabilizing | 0.997 | D | 0.811 | deleterious | N | 0.490074103 | None | None | N |
C/H | 0.7556 | likely_pathogenic | 0.7807 | pathogenic | -2.024 | Highly Destabilizing | 0.323 | N | 0.65 | neutral | None | None | None | None | N |
C/I | 0.7186 | likely_pathogenic | 0.7748 | pathogenic | -0.899 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
C/K | 0.895 | likely_pathogenic | 0.9114 | pathogenic | -0.798 | Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
C/L | 0.6957 | likely_pathogenic | 0.7501 | pathogenic | -0.899 | Destabilizing | 0.993 | D | 0.698 | prob.neutral | None | None | None | None | N |
C/M | 0.8154 | likely_pathogenic | 0.8334 | pathogenic | 0.049 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
C/N | 0.6936 | likely_pathogenic | 0.7526 | pathogenic | -0.952 | Destabilizing | 0.996 | D | 0.845 | deleterious | None | None | None | None | N |
C/P | 0.9939 | likely_pathogenic | 0.9963 | pathogenic | -1.163 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
C/Q | 0.7843 | likely_pathogenic | 0.8061 | pathogenic | -0.743 | Destabilizing | 0.998 | D | 0.863 | deleterious | None | None | None | None | N |
C/R | 0.608 | likely_pathogenic | 0.65 | pathogenic | -0.807 | Destabilizing | 0.997 | D | 0.857 | deleterious | D | 0.526381501 | None | None | N |
C/S | 0.2568 | likely_benign | 0.3135 | benign | -1.508 | Destabilizing | 0.99 | D | 0.759 | deleterious | N | 0.45128631 | None | None | N |
C/T | 0.4607 | ambiguous | 0.5219 | ambiguous | -1.167 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
C/V | 0.587 | likely_pathogenic | 0.6456 | pathogenic | -1.163 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
C/W | 0.8193 | likely_pathogenic | 0.8381 | pathogenic | -1.093 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.495442927 | None | None | N |
C/Y | 0.648 | likely_pathogenic | 0.6954 | pathogenic | -1.068 | Destabilizing | 0.994 | D | 0.821 | deleterious | N | 0.490327592 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.