Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5910 | 17953;17954;17955 | chr2:178730937;178730936;178730935 | chr2:179595664;179595663;179595662 |
N2AB | 5593 | 17002;17003;17004 | chr2:178730937;178730936;178730935 | chr2:179595664;179595663;179595662 |
N2A | 4666 | 14221;14222;14223 | chr2:178730937;178730936;178730935 | chr2:179595664;179595663;179595662 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1311857097 | -1.659 | 0.011 | N | 0.217 | 0.088 | 0.258283824007 | gnomAD-2.1.1 | 4.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.8E-05 | 0 | 0 |
I/V | rs1311857097 | -1.659 | 0.011 | N | 0.217 | 0.088 | 0.258283824007 | gnomAD-4.0.0 | 1.29226E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.5219E-04 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9345 | likely_pathogenic | 0.9415 | pathogenic | -2.903 | Highly Destabilizing | 0.702 | D | 0.747 | deleterious | None | None | None | None | N |
I/C | 0.9386 | likely_pathogenic | 0.9467 | pathogenic | -2.441 | Highly Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
I/D | 0.9968 | likely_pathogenic | 0.998 | pathogenic | -3.03 | Highly Destabilizing | 0.996 | D | 0.889 | deleterious | None | None | None | None | N |
I/E | 0.9884 | likely_pathogenic | 0.9916 | pathogenic | -2.803 | Highly Destabilizing | 0.988 | D | 0.888 | deleterious | None | None | None | None | N |
I/F | 0.4922 | ambiguous | 0.4993 | ambiguous | -1.803 | Destabilizing | 0.968 | D | 0.785 | deleterious | N | 0.467100258 | None | None | N |
I/G | 0.9846 | likely_pathogenic | 0.9886 | pathogenic | -3.461 | Highly Destabilizing | 0.988 | D | 0.877 | deleterious | None | None | None | None | N |
I/H | 0.9872 | likely_pathogenic | 0.9908 | pathogenic | -2.719 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
I/K | 0.9772 | likely_pathogenic | 0.9812 | pathogenic | -2.221 | Highly Destabilizing | 0.988 | D | 0.886 | deleterious | None | None | None | None | N |
I/L | 0.1381 | likely_benign | 0.1389 | benign | -1.282 | Destabilizing | 0.011 | N | 0.287 | neutral | N | 0.301942344 | None | None | N |
I/M | 0.1864 | likely_benign | 0.1624 | benign | -1.353 | Destabilizing | 0.968 | D | 0.76 | deleterious | N | 0.485859377 | None | None | N |
I/N | 0.9595 | likely_pathogenic | 0.9733 | pathogenic | -2.582 | Highly Destabilizing | 0.995 | D | 0.863 | deleterious | N | 0.50540793 | None | None | N |
I/P | 0.9917 | likely_pathogenic | 0.9942 | pathogenic | -1.804 | Destabilizing | 0.996 | D | 0.878 | deleterious | None | None | None | None | N |
I/Q | 0.9802 | likely_pathogenic | 0.9838 | pathogenic | -2.464 | Highly Destabilizing | 0.996 | D | 0.88 | deleterious | None | None | None | None | N |
I/R | 0.9697 | likely_pathogenic | 0.9773 | pathogenic | -1.852 | Destabilizing | 0.996 | D | 0.867 | deleterious | None | None | None | None | N |
I/S | 0.9667 | likely_pathogenic | 0.9755 | pathogenic | -3.371 | Highly Destabilizing | 0.984 | D | 0.861 | deleterious | N | 0.505234572 | None | None | N |
I/T | 0.9408 | likely_pathogenic | 0.9524 | pathogenic | -2.989 | Highly Destabilizing | 0.896 | D | 0.805 | deleterious | N | 0.505234572 | None | None | N |
I/V | 0.1171 | likely_benign | 0.1134 | benign | -1.804 | Destabilizing | 0.011 | N | 0.217 | neutral | N | 0.367469195 | None | None | N |
I/W | 0.9735 | likely_pathogenic | 0.9763 | pathogenic | -2.085 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
I/Y | 0.9205 | likely_pathogenic | 0.9331 | pathogenic | -1.876 | Destabilizing | 0.996 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.