Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5912 | 17959;17960;17961 | chr2:178730931;178730930;178730929 | chr2:179595658;179595657;179595656 |
N2AB | 5595 | 17008;17009;17010 | chr2:178730931;178730930;178730929 | chr2:179595658;179595657;179595656 |
N2A | 4668 | 14227;14228;14229 | chr2:178730931;178730930;178730929 | chr2:179595658;179595657;179595656 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs879030996 | None | 0.767 | D | 0.565 | 0.312 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs879030996 | None | 0.767 | D | 0.565 | 0.312 | None | gnomAD-4.0.0 | 2.49949E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.55864E-06 | 0 | 1.6153E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.907 | likely_pathogenic | 0.9239 | pathogenic | -1.526 | Destabilizing | 0.998 | D | 0.761 | deleterious | D | 0.608535255 | None | None | N |
V/C | 0.9823 | likely_pathogenic | 0.9852 | pathogenic | -1.675 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
V/D | 0.9928 | likely_pathogenic | 0.9962 | pathogenic | -2.793 | Highly Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
V/E | 0.9843 | likely_pathogenic | 0.9907 | pathogenic | -2.773 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.609140668 | None | None | N |
V/F | 0.9373 | likely_pathogenic | 0.9536 | pathogenic | -1.316 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/G | 0.9303 | likely_pathogenic | 0.9526 | pathogenic | -1.819 | Destabilizing | 1.0 | D | 0.761 | deleterious | D | 0.609140668 | None | None | N |
V/H | 0.9963 | likely_pathogenic | 0.9978 | pathogenic | -1.294 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/I | 0.1333 | likely_benign | 0.1363 | benign | -0.794 | Destabilizing | 0.767 | D | 0.565 | neutral | D | 0.525027212 | None | None | N |
V/K | 0.9918 | likely_pathogenic | 0.9949 | pathogenic | -1.345 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/L | 0.8824 | likely_pathogenic | 0.889 | pathogenic | -0.794 | Destabilizing | 0.981 | D | 0.766 | deleterious | D | 0.558226965 | None | None | N |
V/M | 0.8652 | likely_pathogenic | 0.8792 | pathogenic | -0.849 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/N | 0.9762 | likely_pathogenic | 0.9863 | pathogenic | -1.477 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/P | 0.9826 | likely_pathogenic | 0.9878 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/Q | 0.9888 | likely_pathogenic | 0.993 | pathogenic | -1.713 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
V/R | 0.9848 | likely_pathogenic | 0.9907 | pathogenic | -0.835 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
V/S | 0.9472 | likely_pathogenic | 0.9631 | pathogenic | -1.839 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
V/T | 0.8783 | likely_pathogenic | 0.8956 | pathogenic | -1.722 | Destabilizing | 0.998 | D | 0.786 | deleterious | None | None | None | None | N |
V/W | 0.9991 | likely_pathogenic | 0.9994 | pathogenic | -1.563 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
V/Y | 0.993 | likely_pathogenic | 0.9954 | pathogenic | -1.22 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.