Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5924 | 17995;17996;17997 | chr2:178730763;178730762;178730761 | chr2:179595490;179595489;179595488 |
N2AB | 5607 | 17044;17045;17046 | chr2:178730763;178730762;178730761 | chr2:179595490;179595489;179595488 |
N2A | 4680 | 14263;14264;14265 | chr2:178730763;178730762;178730761 | chr2:179595490;179595489;179595488 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.41 | N | 0.552 | 0.29 | 0.437314048365 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/N | rs1336731959 | None | 0.83 | N | 0.661 | 0.347 | 0.303453137403 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs1336731959 | None | 0.83 | N | 0.661 | 0.347 | 0.303453137403 | gnomAD-4.0.0 | 6.88028E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.04007E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6178 | likely_pathogenic | 0.5718 | pathogenic | -0.532 | Destabilizing | 0.648 | D | 0.601 | neutral | None | None | None | None | N |
K/C | 0.8926 | likely_pathogenic | 0.8383 | pathogenic | -0.494 | Destabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/D | 0.8084 | likely_pathogenic | 0.8177 | pathogenic | 0.253 | Stabilizing | 0.866 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/E | 0.4278 | ambiguous | 0.4015 | ambiguous | 0.366 | Stabilizing | 0.41 | N | 0.552 | neutral | N | 0.520418321 | None | None | N |
K/F | 0.9105 | likely_pathogenic | 0.8798 | pathogenic | -0.204 | Destabilizing | 0.98 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/G | 0.6603 | likely_pathogenic | 0.6408 | pathogenic | -0.878 | Destabilizing | 0.866 | D | 0.595 | neutral | None | None | None | None | N |
K/H | 0.4692 | ambiguous | 0.4151 | ambiguous | -1.031 | Destabilizing | 0.98 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/I | 0.6637 | likely_pathogenic | 0.5663 | pathogenic | 0.357 | Stabilizing | 0.929 | D | 0.743 | deleterious | None | None | None | None | N |
K/L | 0.6394 | likely_pathogenic | 0.5511 | ambiguous | 0.357 | Stabilizing | 0.866 | D | 0.595 | neutral | None | None | None | None | N |
K/M | 0.4231 | ambiguous | 0.3628 | ambiguous | 0.086 | Stabilizing | 0.991 | D | 0.706 | prob.neutral | N | 0.508093133 | None | None | N |
K/N | 0.6061 | likely_pathogenic | 0.6094 | pathogenic | -0.228 | Destabilizing | 0.83 | D | 0.661 | neutral | N | 0.497293032 | None | None | N |
K/P | 0.5475 | ambiguous | 0.5716 | pathogenic | 0.09 | Stabilizing | 0.929 | D | 0.743 | deleterious | None | None | None | None | N |
K/Q | 0.2159 | likely_benign | 0.1826 | benign | -0.252 | Destabilizing | 0.709 | D | 0.646 | neutral | N | 0.485327616 | None | None | N |
K/R | 0.1054 | likely_benign | 0.0943 | benign | -0.354 | Destabilizing | 0.01 | N | 0.246 | neutral | N | 0.504507506 | None | None | N |
K/S | 0.6815 | likely_pathogenic | 0.6589 | pathogenic | -0.914 | Destabilizing | 0.648 | D | 0.607 | neutral | None | None | None | None | N |
K/T | 0.3687 | ambiguous | 0.3295 | benign | -0.593 | Destabilizing | 0.83 | D | 0.686 | prob.neutral | D | 0.523093267 | None | None | N |
K/V | 0.6172 | likely_pathogenic | 0.5339 | ambiguous | 0.09 | Stabilizing | 0.866 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/W | 0.8922 | likely_pathogenic | 0.8343 | pathogenic | -0.081 | Destabilizing | 0.993 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/Y | 0.7699 | likely_pathogenic | 0.7166 | pathogenic | 0.188 | Stabilizing | 0.929 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.