Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5925 | 17998;17999;18000 | chr2:178730760;178730759;178730758 | chr2:179595487;179595486;179595485 |
N2AB | 5608 | 17047;17048;17049 | chr2:178730760;178730759;178730758 | chr2:179595487;179595486;179595485 |
N2A | 4681 | 14266;14267;14268 | chr2:178730760;178730759;178730758 | chr2:179595487;179595486;179595485 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs750909367 | None | 1.0 | N | 0.747 | 0.268 | 0.390531646278 | gnomAD-4.0.0 | 6.87957E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03896E-07 | 0 | 0 |
L/V | rs750909367 | -1.37 | 0.999 | N | 0.506 | 0.292 | 0.322786055943 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.11E-06 | 0 |
L/V | rs750909367 | -1.37 | 0.999 | N | 0.506 | 0.292 | 0.322786055943 | gnomAD-4.0.0 | 8.94344E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.08468E-05 | 0 | 1.66539E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9514 | likely_pathogenic | 0.9584 | pathogenic | -2.313 | Highly Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
L/C | 0.9776 | likely_pathogenic | 0.9815 | pathogenic | -1.527 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
L/D | 0.9988 | likely_pathogenic | 0.999 | pathogenic | -1.985 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/E | 0.9922 | likely_pathogenic | 0.9938 | pathogenic | -1.88 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/F | 0.8709 | likely_pathogenic | 0.8874 | pathogenic | -1.482 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/G | 0.9894 | likely_pathogenic | 0.9904 | pathogenic | -2.767 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/H | 0.9909 | likely_pathogenic | 0.9926 | pathogenic | -2.043 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/I | 0.3928 | ambiguous | 0.4365 | ambiguous | -1.06 | Destabilizing | 0.999 | D | 0.53 | neutral | None | None | None | None | N |
L/K | 0.9887 | likely_pathogenic | 0.9907 | pathogenic | -1.607 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
L/M | 0.4422 | ambiguous | 0.4946 | ambiguous | -0.859 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.477638392 | None | None | N |
L/N | 0.9915 | likely_pathogenic | 0.992 | pathogenic | -1.552 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/P | 0.7778 | likely_pathogenic | 0.7684 | pathogenic | -1.453 | Destabilizing | 1.0 | D | 0.862 | deleterious | N | 0.498959173 | None | None | N |
L/Q | 0.9722 | likely_pathogenic | 0.9767 | pathogenic | -1.611 | Destabilizing | 1.0 | D | 0.865 | deleterious | N | 0.515746233 | None | None | N |
L/R | 0.9803 | likely_pathogenic | 0.9836 | pathogenic | -1.135 | Destabilizing | 1.0 | D | 0.875 | deleterious | N | 0.509162867 | None | None | N |
L/S | 0.9939 | likely_pathogenic | 0.9949 | pathogenic | -2.285 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/T | 0.971 | likely_pathogenic | 0.9754 | pathogenic | -2.048 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/V | 0.5209 | ambiguous | 0.5619 | ambiguous | -1.453 | Destabilizing | 0.999 | D | 0.506 | neutral | N | 0.488234229 | None | None | N |
L/W | 0.9784 | likely_pathogenic | 0.981 | pathogenic | -1.678 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/Y | 0.9892 | likely_pathogenic | 0.9914 | pathogenic | -1.462 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.