Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5926 | 18001;18002;18003 | chr2:178730757;178730756;178730755 | chr2:179595484;179595483;179595482 |
N2AB | 5609 | 17050;17051;17052 | chr2:178730757;178730756;178730755 | chr2:179595484;179595483;179595482 |
N2A | 4682 | 14269;14270;14271 | chr2:178730757;178730756;178730755 | chr2:179595484;179595483;179595482 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs755607488 | 0.365 | 0.83 | N | 0.638 | 0.347 | 0.322510055762 | gnomAD-2.1.1 | 1.23E-05 | None | None | None | None | N | None | 0 | 8.78E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs755607488 | 0.365 | 0.83 | N | 0.638 | 0.347 | 0.322510055762 | gnomAD-4.0.0 | 6.87216E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03096E-07 | 0 | 0 |
K/Q | None | None | 0.83 | N | 0.631 | 0.298 | 0.30212335484 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7615 | likely_pathogenic | 0.7548 | pathogenic | 0.081 | Stabilizing | 0.648 | D | 0.573 | neutral | None | None | None | None | N |
K/C | 0.9046 | likely_pathogenic | 0.8924 | pathogenic | -0.339 | Destabilizing | 0.993 | D | 0.682 | prob.neutral | None | None | None | None | N |
K/D | 0.8887 | likely_pathogenic | 0.8938 | pathogenic | -0.195 | Destabilizing | 0.866 | D | 0.675 | neutral | None | None | None | None | N |
K/E | 0.4901 | ambiguous | 0.4865 | ambiguous | -0.196 | Destabilizing | 0.41 | N | 0.541 | neutral | D | 0.522439906 | None | None | N |
K/F | 0.9545 | likely_pathogenic | 0.9497 | pathogenic | -0.183 | Destabilizing | 0.98 | D | 0.649 | neutral | None | None | None | None | N |
K/G | 0.7461 | likely_pathogenic | 0.7415 | pathogenic | -0.079 | Destabilizing | 0.866 | D | 0.507 | neutral | None | None | None | None | N |
K/H | 0.5242 | ambiguous | 0.5099 | ambiguous | -0.21 | Destabilizing | 0.98 | D | 0.669 | neutral | None | None | None | None | N |
K/I | 0.7809 | likely_pathogenic | 0.7678 | pathogenic | 0.421 | Stabilizing | 0.929 | D | 0.674 | neutral | None | None | None | None | N |
K/L | 0.7079 | likely_pathogenic | 0.6857 | pathogenic | 0.421 | Stabilizing | 0.866 | D | 0.507 | neutral | None | None | None | None | N |
K/M | 0.6361 | likely_pathogenic | 0.611 | pathogenic | 0.014 | Stabilizing | 0.991 | D | 0.673 | neutral | N | 0.505361336 | None | None | N |
K/N | 0.7956 | likely_pathogenic | 0.8001 | pathogenic | 0.096 | Stabilizing | 0.83 | D | 0.638 | neutral | N | 0.489192411 | None | None | N |
K/P | 0.8689 | likely_pathogenic | 0.8581 | pathogenic | 0.333 | Stabilizing | 0.929 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/Q | 0.2191 | likely_benign | 0.216 | benign | -0.039 | Destabilizing | 0.83 | D | 0.631 | neutral | N | 0.519746317 | None | None | N |
K/R | 0.0873 | likely_benign | 0.0855 | benign | -0.057 | Destabilizing | 0.01 | N | 0.28 | neutral | N | 0.476302184 | None | None | N |
K/S | 0.7911 | likely_pathogenic | 0.7891 | pathogenic | -0.276 | Destabilizing | 0.648 | D | 0.587 | neutral | None | None | None | None | N |
K/T | 0.5634 | ambiguous | 0.5566 | ambiguous | -0.149 | Destabilizing | 0.83 | D | 0.627 | neutral | N | 0.500411195 | None | None | N |
K/V | 0.7433 | likely_pathogenic | 0.731 | pathogenic | 0.333 | Stabilizing | 0.866 | D | 0.607 | neutral | None | None | None | None | N |
K/W | 0.8928 | likely_pathogenic | 0.8748 | pathogenic | -0.277 | Destabilizing | 0.993 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/Y | 0.8893 | likely_pathogenic | 0.8743 | pathogenic | 0.077 | Stabilizing | 0.929 | D | 0.631 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.