Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5932 | 18019;18020;18021 | chr2:178730739;178730738;178730737 | chr2:179595466;179595465;179595464 |
N2AB | 5615 | 17068;17069;17070 | chr2:178730739;178730738;178730737 | chr2:179595466;179595465;179595464 |
N2A | 4688 | 14287;14288;14289 | chr2:178730739;178730738;178730737 | chr2:179595466;179595465;179595464 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs879062650 | None | 0.998 | N | 0.553 | 0.41 | None | gnomAD-4.0.0 | 1.59791E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87394E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4806 | ambiguous | 0.5182 | ambiguous | -0.169 | Destabilizing | 0.996 | D | 0.532 | neutral | None | None | None | None | N |
K/C | 0.8367 | likely_pathogenic | 0.8481 | pathogenic | -0.377 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/D | 0.8463 | likely_pathogenic | 0.8772 | pathogenic | 0.322 | Stabilizing | 1.0 | D | 0.584 | neutral | None | None | None | None | N |
K/E | 0.2668 | likely_benign | 0.3025 | benign | 0.359 | Stabilizing | 0.998 | D | 0.561 | neutral | N | 0.406544871 | None | None | N |
K/F | 0.9102 | likely_pathogenic | 0.9262 | pathogenic | -0.214 | Destabilizing | 0.998 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/G | 0.7181 | likely_pathogenic | 0.7716 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.534 | neutral | None | None | None | None | N |
K/H | 0.5173 | ambiguous | 0.5388 | ambiguous | -0.682 | Destabilizing | 1.0 | D | 0.574 | neutral | None | None | None | None | N |
K/I | 0.4723 | ambiguous | 0.5163 | ambiguous | 0.43 | Stabilizing | 0.994 | D | 0.611 | neutral | N | 0.427059003 | None | None | N |
K/L | 0.5138 | ambiguous | 0.5275 | ambiguous | 0.43 | Stabilizing | 0.269 | N | 0.426 | neutral | None | None | None | None | N |
K/M | 0.3629 | ambiguous | 0.3809 | ambiguous | 0.24 | Stabilizing | 0.998 | D | 0.575 | neutral | None | None | None | None | N |
K/N | 0.6914 | likely_pathogenic | 0.733 | pathogenic | 0.093 | Stabilizing | 0.999 | D | 0.617 | neutral | N | 0.499479248 | None | None | N |
K/P | 0.8155 | likely_pathogenic | 0.8782 | pathogenic | 0.26 | Stabilizing | 1.0 | D | 0.57 | neutral | None | None | None | None | N |
K/Q | 0.1716 | likely_benign | 0.1888 | benign | -0.077 | Destabilizing | 0.999 | D | 0.629 | neutral | N | 0.468156264 | None | None | N |
K/R | 0.0962 | likely_benign | 0.0973 | benign | -0.132 | Destabilizing | 0.998 | D | 0.539 | neutral | N | 0.46690547 | None | None | N |
K/S | 0.5922 | likely_pathogenic | 0.6516 | pathogenic | -0.541 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | N |
K/T | 0.31 | likely_benign | 0.3586 | ambiguous | -0.333 | Destabilizing | 0.998 | D | 0.553 | neutral | N | 0.460267499 | None | None | N |
K/V | 0.4463 | ambiguous | 0.4912 | ambiguous | 0.26 | Stabilizing | 0.983 | D | 0.503 | neutral | None | None | None | None | N |
K/W | 0.9002 | likely_pathogenic | 0.9141 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
K/Y | 0.8176 | likely_pathogenic | 0.8372 | pathogenic | 0.198 | Stabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.