Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5934 | 18025;18026;18027 | chr2:178730733;178730732;178730731 | chr2:179595460;179595459;179595458 |
N2AB | 5617 | 17074;17075;17076 | chr2:178730733;178730732;178730731 | chr2:179595460;179595459;179595458 |
N2A | 4690 | 14293;14294;14295 | chr2:178730733;178730732;178730731 | chr2:179595460;179595459;179595458 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 1.0 | N | 0.771 | 0.432 | 0.594113984522 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1318 | likely_benign | 0.1334 | benign | -0.759 | Destabilizing | 0.997 | D | 0.471 | neutral | N | 0.490110404 | None | None | N |
S/C | 0.269 | likely_benign | 0.2652 | benign | -0.423 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.488915337 | None | None | N |
S/D | 0.645 | likely_pathogenic | 0.6708 | pathogenic | 0.76 | Stabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
S/E | 0.778 | likely_pathogenic | 0.8014 | pathogenic | 0.735 | Stabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | N |
S/F | 0.4619 | ambiguous | 0.4699 | ambiguous | -1.03 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.500271643 | None | None | N |
S/G | 0.1889 | likely_benign | 0.2043 | benign | -0.957 | Destabilizing | 0.999 | D | 0.493 | neutral | None | None | None | None | N |
S/H | 0.5612 | ambiguous | 0.5658 | pathogenic | -1.28 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
S/I | 0.4673 | ambiguous | 0.4801 | ambiguous | -0.343 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/K | 0.8757 | likely_pathogenic | 0.8885 | pathogenic | -0.253 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
S/L | 0.2229 | likely_benign | 0.2244 | benign | -0.343 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
S/M | 0.3899 | ambiguous | 0.3963 | ambiguous | -0.183 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
S/N | 0.2792 | likely_benign | 0.3085 | benign | -0.087 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
S/P | 0.8706 | likely_pathogenic | 0.8965 | pathogenic | -0.451 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.488408358 | None | None | N |
S/Q | 0.7054 | likely_pathogenic | 0.7165 | pathogenic | -0.246 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
S/R | 0.8179 | likely_pathogenic | 0.8278 | pathogenic | -0.194 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/T | 0.1479 | likely_benign | 0.151 | benign | -0.296 | Destabilizing | 0.999 | D | 0.47 | neutral | N | 0.510947036 | None | None | N |
S/V | 0.4158 | ambiguous | 0.4251 | ambiguous | -0.451 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
S/W | 0.6563 | likely_pathogenic | 0.6513 | pathogenic | -0.92 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
S/Y | 0.3449 | ambiguous | 0.346 | ambiguous | -0.67 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.461340881 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.