Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5936 | 18031;18032;18033 | chr2:178730727;178730726;178730725 | chr2:179595454;179595453;179595452 |
N2AB | 5619 | 17080;17081;17082 | chr2:178730727;178730726;178730725 | chr2:179595454;179595453;179595452 |
N2A | 4692 | 14299;14300;14301 | chr2:178730727;178730726;178730725 | chr2:179595454;179595453;179595452 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs1365679296 | -2.522 | 0.27 | N | 0.535 | 0.457 | 0.619501705969 | gnomAD-2.1.1 | 8.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.55E-05 | None | 0 | 0 | 0 |
I/S | rs1365679296 | -2.522 | 0.27 | N | 0.535 | 0.457 | 0.619501705969 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
I/S | rs1365679296 | -2.522 | 0.27 | N | 0.535 | 0.457 | 0.619501705969 | gnomAD-4.0.0 | 1.23973E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.19703E-05 | 0 |
I/T | rs1365679296 | -2.095 | 0.01 | N | 0.366 | 0.32 | 0.38225645794 | gnomAD-2.1.1 | 6.37E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.29618E-04 | 0 |
I/T | rs1365679296 | -2.095 | 0.01 | N | 0.366 | 0.32 | 0.38225645794 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
I/T | rs1365679296 | -2.095 | 0.01 | N | 0.366 | 0.32 | 0.38225645794 | gnomAD-4.0.0 | 1.8596E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54343E-06 | 0 | 0 |
I/V | rs72648945 | -0.838 | 0.001 | N | 0.157 | 0.078 | None | gnomAD-2.1.1 | 9.71E-05 | None | None | None | None | N | None | 8.29E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.82271E-04 | 2.82725E-04 |
I/V | rs72648945 | -0.838 | 0.001 | N | 0.157 | 0.078 | None | gnomAD-3.1.2 | 9.2E-05 | None | None | None | None | N | None | 4.83E-05 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.61689E-04 | 0 | 0 |
I/V | rs72648945 | -0.838 | 0.001 | N | 0.157 | 0.078 | None | gnomAD-4.0.0 | 1.17777E-04 | None | None | None | None | N | None | 5.34074E-05 | 3.33622E-05 | None | 0 | 0 | None | 0 | 3.29272E-04 | 1.44976E-04 | 0 | 1.76158E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2549 | likely_benign | 0.2604 | benign | -1.909 | Destabilizing | 0.004 | N | 0.352 | neutral | None | None | None | None | N |
I/C | 0.7473 | likely_pathogenic | 0.7621 | pathogenic | -1.261 | Destabilizing | 0.981 | D | 0.668 | neutral | None | None | None | None | N |
I/D | 0.9538 | likely_pathogenic | 0.9628 | pathogenic | -1.083 | Destabilizing | 0.828 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/E | 0.9073 | likely_pathogenic | 0.9205 | pathogenic | -0.926 | Destabilizing | 0.828 | D | 0.661 | neutral | None | None | None | None | N |
I/F | 0.3976 | ambiguous | 0.4381 | ambiguous | -0.98 | Destabilizing | 0.642 | D | 0.629 | neutral | N | 0.503578346 | None | None | N |
I/G | 0.8059 | likely_pathogenic | 0.8251 | pathogenic | -2.387 | Highly Destabilizing | 0.495 | N | 0.574 | neutral | None | None | None | None | N |
I/H | 0.8692 | likely_pathogenic | 0.8873 | pathogenic | -1.479 | Destabilizing | 0.981 | D | 0.701 | prob.neutral | None | None | None | None | N |
I/K | 0.8129 | likely_pathogenic | 0.8456 | pathogenic | -1.22 | Destabilizing | 0.704 | D | 0.667 | neutral | None | None | None | None | N |
I/L | 0.1758 | likely_benign | 0.1778 | benign | -0.589 | Destabilizing | 0.065 | N | 0.394 | neutral | N | 0.456552404 | None | None | N |
I/M | 0.1313 | likely_benign | 0.1329 | benign | -0.6 | Destabilizing | 0.927 | D | 0.627 | neutral | N | 0.507330728 | None | None | N |
I/N | 0.7371 | likely_pathogenic | 0.7731 | pathogenic | -1.326 | Destabilizing | 0.927 | D | 0.729 | prob.delet. | N | 0.481420146 | None | None | N |
I/P | 0.9264 | likely_pathogenic | 0.9272 | pathogenic | -1.002 | Destabilizing | 0.828 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/Q | 0.8057 | likely_pathogenic | 0.8273 | pathogenic | -1.257 | Destabilizing | 0.981 | D | 0.725 | prob.delet. | None | None | None | None | N |
I/R | 0.7037 | likely_pathogenic | 0.7403 | pathogenic | -0.898 | Destabilizing | 0.944 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/S | 0.4349 | ambiguous | 0.4528 | ambiguous | -2.146 | Highly Destabilizing | 0.27 | N | 0.535 | neutral | N | 0.469810351 | None | None | N |
I/T | 0.1433 | likely_benign | 0.1475 | benign | -1.836 | Destabilizing | 0.01 | N | 0.366 | neutral | N | 0.462982518 | None | None | N |
I/V | 0.0737 | likely_benign | 0.076 | benign | -1.002 | Destabilizing | 0.001 | N | 0.157 | neutral | N | 0.388844544 | None | None | N |
I/W | 0.9185 | likely_pathogenic | 0.9249 | pathogenic | -1.135 | Destabilizing | 0.995 | D | 0.694 | prob.neutral | None | None | None | None | N |
I/Y | 0.8499 | likely_pathogenic | 0.8643 | pathogenic | -0.872 | Destabilizing | 0.944 | D | 0.697 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.