Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5938 | 18037;18038;18039 | chr2:178730721;178730720;178730719 | chr2:179595448;179595447;179595446 |
N2AB | 5621 | 17086;17087;17088 | chr2:178730721;178730720;178730719 | chr2:179595448;179595447;179595446 |
N2A | 4694 | 14305;14306;14307 | chr2:178730721;178730720;178730719 | chr2:179595448;179595447;179595446 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1217786152 | None | 0.999 | N | 0.793 | 0.409 | 0.500050830518 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9245 | likely_pathogenic | 0.907 | pathogenic | -2.387 | Highly Destabilizing | 0.997 | D | 0.761 | deleterious | None | None | None | None | N |
L/C | 0.9492 | likely_pathogenic | 0.9382 | pathogenic | -1.675 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -3.158 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/E | 0.9936 | likely_pathogenic | 0.9929 | pathogenic | -2.883 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
L/F | 0.3042 | likely_benign | 0.2818 | benign | -1.563 | Destabilizing | 0.999 | D | 0.793 | deleterious | N | 0.512068196 | None | None | N |
L/G | 0.9902 | likely_pathogenic | 0.989 | pathogenic | -2.915 | Highly Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
L/H | 0.976 | likely_pathogenic | 0.9724 | pathogenic | -2.516 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
L/I | 0.2434 | likely_benign | 0.226 | benign | -0.815 | Destabilizing | 0.992 | D | 0.689 | prob.neutral | D | 0.551213818 | None | None | N |
L/K | 0.9856 | likely_pathogenic | 0.9848 | pathogenic | -1.869 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/M | 0.1414 | likely_benign | 0.1359 | benign | -0.85 | Destabilizing | 0.985 | D | 0.626 | neutral | None | None | None | None | N |
L/N | 0.9946 | likely_pathogenic | 0.9943 | pathogenic | -2.441 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/P | 0.9976 | likely_pathogenic | 0.9977 | pathogenic | -1.328 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/Q | 0.9633 | likely_pathogenic | 0.9574 | pathogenic | -2.199 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/R | 0.9784 | likely_pathogenic | 0.974 | pathogenic | -1.869 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
L/S | 0.985 | likely_pathogenic | 0.9819 | pathogenic | -2.987 | Highly Destabilizing | 0.999 | D | 0.851 | deleterious | D | 0.639829276 | None | None | N |
L/T | 0.9435 | likely_pathogenic | 0.9316 | pathogenic | -2.556 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/V | 0.293 | likely_benign | 0.258 | benign | -1.328 | Destabilizing | 0.992 | D | 0.692 | prob.neutral | D | 0.579386103 | None | None | N |
L/W | 0.8507 | likely_pathogenic | 0.8293 | pathogenic | -1.931 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/Y | 0.9006 | likely_pathogenic | 0.8989 | pathogenic | -1.633 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.