Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5939 | 18040;18041;18042 | chr2:178730718;178730717;178730716 | chr2:179595445;179595444;179595443 |
N2AB | 5622 | 17089;17090;17091 | chr2:178730718;178730717;178730716 | chr2:179595445;179595444;179595443 |
N2A | 4695 | 14308;14309;14310 | chr2:178730718;178730717;178730716 | chr2:179595445;179595444;179595443 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.999 | D | 0.718 | 0.675 | 0.751210634423 | gnomAD-4.0.0 | 1.59203E-06 | None | None | None | None | N | None | 0 | 2.28749E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.491 | ambiguous | 0.4715 | ambiguous | -0.842 | Destabilizing | 0.998 | D | 0.639 | neutral | N | 0.502052746 | None | None | N |
E/C | 0.981 | likely_pathogenic | 0.9807 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/D | 0.7115 | likely_pathogenic | 0.6983 | pathogenic | -1.214 | Destabilizing | 0.434 | N | 0.283 | neutral | N | 0.502795352 | None | None | N |
E/F | 0.9807 | likely_pathogenic | 0.9781 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
E/G | 0.6716 | likely_pathogenic | 0.6626 | pathogenic | -1.259 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | D | 0.522665443 | None | None | N |
E/H | 0.877 | likely_pathogenic | 0.8719 | pathogenic | -0.311 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/I | 0.8882 | likely_pathogenic | 0.8725 | pathogenic | 0.315 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/K | 0.6405 | likely_pathogenic | 0.6507 | pathogenic | -0.727 | Destabilizing | 0.998 | D | 0.527 | neutral | N | 0.485897047 | None | None | N |
E/L | 0.9044 | likely_pathogenic | 0.8928 | pathogenic | 0.315 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/M | 0.8995 | likely_pathogenic | 0.8882 | pathogenic | 0.802 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/N | 0.8292 | likely_pathogenic | 0.8118 | pathogenic | -1.308 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/P | 0.982 | likely_pathogenic | 0.9821 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/Q | 0.319 | likely_benign | 0.3207 | benign | -1.118 | Destabilizing | 0.999 | D | 0.662 | neutral | N | 0.491999887 | None | None | N |
E/R | 0.7254 | likely_pathogenic | 0.7382 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/S | 0.607 | likely_pathogenic | 0.594 | pathogenic | -1.673 | Destabilizing | 0.997 | D | 0.574 | neutral | None | None | None | None | N |
E/T | 0.6852 | likely_pathogenic | 0.6678 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/V | 0.7012 | likely_pathogenic | 0.6731 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.505802182 | None | None | N |
E/W | 0.9938 | likely_pathogenic | 0.9933 | pathogenic | 0.239 | Stabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
E/Y | 0.9633 | likely_pathogenic | 0.9595 | pathogenic | 0.223 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.