Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5943 | 18052;18053;18054 | chr2:178730706;178730705;178730704 | chr2:179595433;179595432;179595431 |
N2AB | 5626 | 17101;17102;17103 | chr2:178730706;178730705;178730704 | chr2:179595433;179595432;179595431 |
N2A | 4699 | 14320;14321;14322 | chr2:178730706;178730705;178730704 | chr2:179595433;179595432;179595431 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs1421739163 | None | 0.079 | N | 0.214 | 0.069 | 0.183819452728 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/S | rs1421739163 | None | 0.079 | N | 0.214 | 0.069 | 0.183819452728 | gnomAD-4.0.0 | 2.03E-06 | None | None | None | None | N | None | 1.74764E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20493E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6999 | likely_pathogenic | 0.6605 | pathogenic | -0.904 | Destabilizing | 0.999 | D | 0.522 | neutral | None | None | None | None | N |
A/D | 0.6462 | likely_pathogenic | 0.6094 | pathogenic | -0.478 | Destabilizing | 0.982 | D | 0.532 | neutral | N | 0.476531471 | None | None | N |
A/E | 0.5422 | ambiguous | 0.5223 | ambiguous | -0.559 | Destabilizing | 0.953 | D | 0.497 | neutral | None | None | None | None | N |
A/F | 0.489 | ambiguous | 0.4492 | ambiguous | -0.858 | Destabilizing | 0.993 | D | 0.631 | neutral | None | None | None | None | N |
A/G | 0.2108 | likely_benign | 0.227 | benign | -0.764 | Destabilizing | 0.76 | D | 0.441 | neutral | N | 0.492578359 | None | None | N |
A/H | 0.6565 | likely_pathogenic | 0.6103 | pathogenic | -0.812 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
A/I | 0.5613 | ambiguous | 0.5018 | ambiguous | -0.254 | Destabilizing | 0.993 | D | 0.555 | neutral | None | None | None | None | N |
A/K | 0.7395 | likely_pathogenic | 0.7235 | pathogenic | -0.926 | Destabilizing | 0.953 | D | 0.486 | neutral | None | None | None | None | N |
A/L | 0.3526 | ambiguous | 0.2991 | benign | -0.254 | Destabilizing | 0.953 | D | 0.489 | neutral | None | None | None | None | N |
A/M | 0.4002 | ambiguous | 0.3462 | ambiguous | -0.322 | Destabilizing | 0.999 | D | 0.552 | neutral | None | None | None | None | N |
A/N | 0.4835 | ambiguous | 0.4204 | ambiguous | -0.623 | Destabilizing | 0.986 | D | 0.529 | neutral | None | None | None | None | N |
A/P | 0.9689 | likely_pathogenic | 0.9691 | pathogenic | -0.322 | Destabilizing | 0.991 | D | 0.555 | neutral | N | 0.48854362 | None | None | N |
A/Q | 0.5373 | ambiguous | 0.5021 | ambiguous | -0.798 | Destabilizing | 0.993 | D | 0.571 | neutral | None | None | None | None | N |
A/R | 0.6354 | likely_pathogenic | 0.6176 | pathogenic | -0.554 | Destabilizing | 0.986 | D | 0.563 | neutral | None | None | None | None | N |
A/S | 0.098 | likely_benign | 0.0957 | benign | -0.976 | Destabilizing | 0.079 | N | 0.214 | neutral | N | 0.378906136 | None | None | N |
A/T | 0.1344 | likely_benign | 0.1211 | benign | -0.951 | Destabilizing | 0.885 | D | 0.402 | neutral | N | 0.459252432 | None | None | N |
A/V | 0.2987 | likely_benign | 0.2605 | benign | -0.322 | Destabilizing | 0.939 | D | 0.453 | neutral | N | 0.473376522 | None | None | N |
A/W | 0.8557 | likely_pathogenic | 0.8257 | pathogenic | -1.092 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
A/Y | 0.6195 | likely_pathogenic | 0.5746 | pathogenic | -0.706 | Destabilizing | 0.998 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.