Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5952 | 18079;18080;18081 | chr2:178730679;178730678;178730677 | chr2:179595406;179595405;179595404 |
N2AB | 5635 | 17128;17129;17130 | chr2:178730679;178730678;178730677 | chr2:179595406;179595405;179595404 |
N2A | 4708 | 14347;14348;14349 | chr2:178730679;178730678;178730677 | chr2:179595406;179595405;179595404 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/R | None | None | 0.928 | D | 0.874 | 0.889 | 0.937825855988 | gnomAD-4.0.0 | 1.59159E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85892E-06 | 0 | 0 |
W/S | rs2080292615 | None | 0.864 | D | 0.867 | 0.885 | 0.967651819318 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
W/S | rs2080292615 | None | 0.864 | D | 0.867 | 0.885 | 0.967651819318 | gnomAD-4.0.0 | 6.57583E-06 | None | None | None | None | N | None | 2.41406E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.9988 | likely_pathogenic | 0.9976 | pathogenic | -2.516 | Highly Destabilizing | 0.547 | D | 0.83 | deleterious | None | None | None | None | N |
W/C | 0.9993 | likely_pathogenic | 0.9987 | pathogenic | -0.995 | Destabilizing | 0.98 | D | 0.832 | deleterious | D | 0.719084813 | None | None | N |
W/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.163 | Highly Destabilizing | 0.945 | D | 0.862 | deleterious | None | None | None | None | N |
W/E | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.029 | Highly Destabilizing | 0.945 | D | 0.869 | deleterious | None | None | None | None | N |
W/F | 0.823 | likely_pathogenic | 0.7811 | pathogenic | -1.597 | Destabilizing | 0.894 | D | 0.767 | deleterious | None | None | None | None | N |
W/G | 0.9925 | likely_pathogenic | 0.9883 | pathogenic | -2.766 | Highly Destabilizing | 0.928 | D | 0.825 | deleterious | D | 0.718883009 | None | None | N |
W/H | 0.9989 | likely_pathogenic | 0.9981 | pathogenic | -2.262 | Highly Destabilizing | 0.995 | D | 0.836 | deleterious | None | None | None | None | N |
W/I | 0.9913 | likely_pathogenic | 0.9847 | pathogenic | -1.571 | Destabilizing | 0.593 | D | 0.84 | deleterious | None | None | None | None | N |
W/K | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -2.107 | Highly Destabilizing | 0.945 | D | 0.869 | deleterious | None | None | None | None | N |
W/L | 0.9771 | likely_pathogenic | 0.9643 | pathogenic | -1.571 | Destabilizing | 0.477 | N | 0.812 | deleterious | D | 0.718883009 | None | None | N |
W/M | 0.9962 | likely_pathogenic | 0.9937 | pathogenic | -1.013 | Destabilizing | 0.97 | D | 0.781 | deleterious | None | None | None | None | N |
W/N | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -2.877 | Highly Destabilizing | 0.981 | D | 0.876 | deleterious | None | None | None | None | N |
W/P | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -1.915 | Destabilizing | 0.981 | D | 0.873 | deleterious | None | None | None | None | N |
W/Q | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -2.606 | Highly Destabilizing | 0.981 | D | 0.861 | deleterious | None | None | None | None | N |
W/R | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -2.197 | Highly Destabilizing | 0.928 | D | 0.874 | deleterious | D | 0.719084813 | None | None | N |
W/S | 0.9987 | likely_pathogenic | 0.9975 | pathogenic | -2.899 | Highly Destabilizing | 0.864 | D | 0.867 | deleterious | D | 0.719084813 | None | None | N |
W/T | 0.9989 | likely_pathogenic | 0.9978 | pathogenic | -2.681 | Highly Destabilizing | 0.809 | D | 0.821 | deleterious | None | None | None | None | N |
W/V | 0.9936 | likely_pathogenic | 0.9885 | pathogenic | -1.915 | Destabilizing | 0.017 | N | 0.752 | deleterious | None | None | None | None | N |
W/Y | 0.9582 | likely_pathogenic | 0.9411 | pathogenic | -1.441 | Destabilizing | 0.945 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.