Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5954 | 18085;18086;18087 | chr2:178730673;178730672;178730671 | chr2:179595400;179595399;179595398 |
N2AB | 5637 | 17134;17135;17136 | chr2:178730673;178730672;178730671 | chr2:179595400;179595399;179595398 |
N2A | 4710 | 14353;14354;14355 | chr2:178730673;178730672;178730671 | chr2:179595400;179595399;179595398 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1036512589 | None | 1.0 | N | 0.785 | 0.506 | 0.4897983601 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
K/T | rs1036512589 | None | 1.0 | N | 0.785 | 0.506 | 0.4897983601 | gnomAD-4.0.0 | 1.31451E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.9404E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9712 | likely_pathogenic | 0.9478 | pathogenic | -1.222 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/C | 0.9334 | likely_pathogenic | 0.9027 | pathogenic | -1.405 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
K/D | 0.9957 | likely_pathogenic | 0.9921 | pathogenic | -1.161 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
K/E | 0.8872 | likely_pathogenic | 0.8102 | pathogenic | -0.944 | Destabilizing | 0.999 | D | 0.597 | neutral | D | 0.536856363 | None | None | N |
K/F | 0.9694 | likely_pathogenic | 0.9432 | pathogenic | -0.853 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
K/G | 0.9893 | likely_pathogenic | 0.9812 | pathogenic | -1.667 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
K/H | 0.4886 | ambiguous | 0.4633 | ambiguous | -2.007 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
K/I | 0.9031 | likely_pathogenic | 0.8391 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.517484661 | None | None | N |
K/L | 0.8268 | likely_pathogenic | 0.7326 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
K/M | 0.7703 | likely_pathogenic | 0.6719 | pathogenic | -0.147 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
K/N | 0.9753 | likely_pathogenic | 0.9584 | pathogenic | -1.345 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | N | 0.513725679 | None | None | N |
K/P | 0.9988 | likely_pathogenic | 0.9977 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
K/Q | 0.5218 | ambiguous | 0.4202 | ambiguous | -1.224 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.48178313 | None | None | N |
K/R | 0.1128 | likely_benign | 0.0946 | benign | -0.968 | Destabilizing | 0.999 | D | 0.607 | neutral | N | 0.515952998 | None | None | N |
K/S | 0.9809 | likely_pathogenic | 0.9648 | pathogenic | -2.01 | Highly Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | N |
K/T | 0.952 | likely_pathogenic | 0.9142 | pathogenic | -1.54 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.513472189 | None | None | N |
K/V | 0.8936 | likely_pathogenic | 0.8323 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
K/W | 0.9496 | likely_pathogenic | 0.9047 | pathogenic | -0.789 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
K/Y | 0.9168 | likely_pathogenic | 0.8675 | pathogenic | -0.424 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.