Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5958 | 18097;18098;18099 | chr2:178730661;178730660;178730659 | chr2:179595388;179595387;179595386 |
N2AB | 5641 | 17146;17147;17148 | chr2:178730661;178730660;178730659 | chr2:179595388;179595387;179595386 |
N2A | 4714 | 14365;14366;14367 | chr2:178730661;178730660;178730659 | chr2:179595388;179595387;179595386 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs2080287202 | None | 0.999 | N | 0.498 | 0.228 | 0.349870743963 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs2080287202 | None | 0.999 | N | 0.498 | 0.228 | 0.349870743963 | gnomAD-4.0.0 | 4.95792E-06 | None | None | None | None | N | None | 1.33508E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93363E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1679 | likely_benign | 0.1321 | benign | -0.499 | Destabilizing | 0.999 | D | 0.67 | neutral | N | 0.490758893 | None | None | N |
E/C | 0.9255 | likely_pathogenic | 0.8755 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/D | 0.3346 | likely_benign | 0.312 | benign | -0.516 | Destabilizing | 0.999 | D | 0.498 | neutral | N | 0.484060168 | None | None | N |
E/F | 0.8923 | likely_pathogenic | 0.8403 | pathogenic | 0.083 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/G | 0.3364 | likely_benign | 0.2898 | benign | -0.778 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.506193802 | None | None | N |
E/H | 0.6879 | likely_pathogenic | 0.6139 | pathogenic | 0.355 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
E/I | 0.3897 | ambiguous | 0.2915 | benign | 0.235 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/K | 0.1637 | likely_benign | 0.1394 | benign | 0.17 | Stabilizing | 0.999 | D | 0.646 | neutral | D | 0.534635625 | None | None | N |
E/L | 0.4011 | ambiguous | 0.3139 | benign | 0.235 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/M | 0.4677 | ambiguous | 0.3644 | ambiguous | 0.238 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
E/N | 0.4753 | ambiguous | 0.4128 | ambiguous | -0.515 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/P | 0.3412 | ambiguous | 0.2995 | benign | 0.012 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/Q | 0.1695 | likely_benign | 0.1472 | benign | -0.399 | Destabilizing | 1.0 | D | 0.603 | neutral | N | 0.486884552 | None | None | N |
E/R | 0.3568 | ambiguous | 0.3009 | benign | 0.55 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/S | 0.4313 | ambiguous | 0.3682 | ambiguous | -0.669 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
E/T | 0.383 | ambiguous | 0.3015 | benign | -0.422 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/V | 0.2282 | likely_benign | 0.1692 | benign | 0.012 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | N | 0.488481168 | None | None | N |
E/W | 0.9702 | likely_pathogenic | 0.9506 | pathogenic | 0.375 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/Y | 0.83 | likely_pathogenic | 0.7664 | pathogenic | 0.365 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.