Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5959 | 18100;18101;18102 | chr2:178730658;178730657;178730656 | chr2:179595385;179595384;179595383 |
N2AB | 5642 | 17149;17150;17151 | chr2:178730658;178730657;178730656 | chr2:179595385;179595384;179595383 |
N2A | 4715 | 14368;14369;14370 | chr2:178730658;178730657;178730656 | chr2:179595385;179595384;179595383 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs576711300 | -0.259 | 0.911 | N | 0.403 | 0.376 | 0.566010919861 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/M | rs576711300 | -0.259 | 0.911 | N | 0.403 | 0.376 | 0.566010919861 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
I/M | rs576711300 | -0.259 | 0.911 | N | 0.403 | 0.376 | 0.566010919861 | gnomAD-4.0.0 | 3.84328E-06 | None | None | None | None | N | None | 0 | 1.69457E-05 | None | 0 | 0 | None | 0 | 0 | 4.78698E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9576 | likely_pathogenic | 0.9298 | pathogenic | -1.798 | Destabilizing | 0.985 | D | 0.524 | neutral | None | None | None | None | N |
I/C | 0.9785 | likely_pathogenic | 0.961 | pathogenic | -0.962 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
I/D | 0.9964 | likely_pathogenic | 0.994 | pathogenic | -2.474 | Highly Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
I/E | 0.9917 | likely_pathogenic | 0.9869 | pathogenic | -2.182 | Highly Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
I/F | 0.5845 | likely_pathogenic | 0.4848 | ambiguous | -1.142 | Destabilizing | 0.998 | D | 0.522 | neutral | None | None | None | None | N |
I/G | 0.9909 | likely_pathogenic | 0.9838 | pathogenic | -2.34 | Highly Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | N |
I/H | 0.9875 | likely_pathogenic | 0.9776 | pathogenic | -2.185 | Highly Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/K | 0.9737 | likely_pathogenic | 0.9615 | pathogenic | -1.237 | Destabilizing | 0.997 | D | 0.702 | prob.neutral | D | 0.561813695 | None | None | N |
I/L | 0.1587 | likely_benign | 0.1245 | benign | -0.195 | Destabilizing | 0.817 | D | 0.368 | neutral | N | 0.504424574 | None | None | N |
I/M | 0.2667 | likely_benign | 0.2246 | benign | -0.281 | Destabilizing | 0.911 | D | 0.403 | neutral | N | 0.507309893 | None | None | N |
I/N | 0.9649 | likely_pathogenic | 0.945 | pathogenic | -1.873 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
I/P | 0.9924 | likely_pathogenic | 0.9876 | pathogenic | -0.717 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
I/Q | 0.9832 | likely_pathogenic | 0.9722 | pathogenic | -1.528 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
I/R | 0.9677 | likely_pathogenic | 0.9496 | pathogenic | -1.495 | Destabilizing | 0.997 | D | 0.745 | deleterious | D | 0.561813695 | None | None | N |
I/S | 0.9801 | likely_pathogenic | 0.9653 | pathogenic | -2.384 | Highly Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
I/T | 0.9612 | likely_pathogenic | 0.9391 | pathogenic | -1.929 | Destabilizing | 0.98 | D | 0.568 | neutral | D | 0.53605921 | None | None | N |
I/V | 0.2004 | likely_benign | 0.1682 | benign | -0.717 | Destabilizing | 0.219 | N | 0.201 | neutral | N | 0.510086684 | None | None | N |
I/W | 0.9859 | likely_pathogenic | 0.9751 | pathogenic | -1.547 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/Y | 0.9388 | likely_pathogenic | 0.9005 | pathogenic | -1.181 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.