Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5960 | 18103;18104;18105 | chr2:178730655;178730654;178730653 | chr2:179595382;179595381;179595380 |
N2AB | 5643 | 17152;17153;17154 | chr2:178730655;178730654;178730653 | chr2:179595382;179595381;179595380 |
N2A | 4716 | 14371;14372;14373 | chr2:178730655;178730654;178730653 | chr2:179595382;179595381;179595380 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.001 | N | 0.189 | 0.049 | 0.119812018005 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85883E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0563 | likely_benign | 0.0549 | benign | -0.334 | Destabilizing | 0.001 | N | 0.189 | neutral | N | 0.499522974 | None | None | N |
S/C | 0.1319 | likely_benign | 0.1135 | benign | -0.499 | Destabilizing | 0.245 | N | 0.323 | neutral | None | None | None | None | N |
S/D | 0.2303 | likely_benign | 0.2055 | benign | 0.432 | Stabilizing | 0.009 | N | 0.186 | neutral | None | None | None | None | N |
S/E | 0.236 | likely_benign | 0.2048 | benign | 0.368 | Stabilizing | None | N | 0.151 | neutral | None | None | None | None | N |
S/F | 0.108 | likely_benign | 0.0998 | benign | -1.044 | Destabilizing | 0.022 | N | 0.455 | neutral | None | None | None | None | N |
S/G | 0.0933 | likely_benign | 0.0875 | benign | -0.418 | Destabilizing | 0.018 | N | 0.17 | neutral | None | None | None | None | N |
S/H | 0.1612 | likely_benign | 0.1344 | benign | -0.644 | Destabilizing | 0.245 | N | 0.311 | neutral | None | None | None | None | N |
S/I | 0.079 | likely_benign | 0.0753 | benign | -0.238 | Destabilizing | 0.009 | N | 0.375 | neutral | None | None | None | None | N |
S/K | 0.2294 | likely_benign | 0.1878 | benign | -0.223 | Destabilizing | 0.009 | N | 0.18 | neutral | None | None | None | None | N |
S/L | 0.0546 | likely_benign | 0.0515 | benign | -0.238 | Destabilizing | None | N | 0.156 | neutral | N | 0.46356496 | None | None | N |
S/M | 0.1138 | likely_benign | 0.1026 | benign | -0.407 | Destabilizing | 0.138 | N | 0.327 | neutral | None | None | None | None | N |
S/N | 0.1031 | likely_benign | 0.0966 | benign | -0.187 | Destabilizing | 0.018 | N | 0.201 | neutral | None | None | None | None | N |
S/P | 0.0893 | likely_benign | 0.0792 | benign | -0.244 | Destabilizing | None | N | 0.204 | neutral | N | 0.47541675 | None | None | N |
S/Q | 0.2113 | likely_benign | 0.1777 | benign | -0.279 | Destabilizing | 0.001 | N | 0.139 | neutral | None | None | None | None | N |
S/R | 0.2138 | likely_benign | 0.1747 | benign | -0.051 | Destabilizing | 0.044 | N | 0.367 | neutral | None | None | None | None | N |
S/T | 0.0569 | likely_benign | 0.0543 | benign | -0.263 | Destabilizing | None | N | 0.099 | neutral | N | 0.428316236 | None | None | N |
S/V | 0.0837 | likely_benign | 0.0789 | benign | -0.244 | Destabilizing | None | N | 0.198 | neutral | None | None | None | None | N |
S/W | 0.1971 | likely_benign | 0.1832 | benign | -1.135 | Destabilizing | 0.788 | D | 0.399 | neutral | None | None | None | None | N |
S/Y | 0.123 | likely_benign | 0.1156 | benign | -0.791 | Destabilizing | 0.245 | N | 0.455 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.