Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5967 | 18124;18125;18126 | chr2:178730634;178730633;178730632 | chr2:179595361;179595360;179595359 |
N2AB | 5650 | 17173;17174;17175 | chr2:178730634;178730633;178730632 | chr2:179595361;179595360;179595359 |
N2A | 4723 | 14392;14393;14394 | chr2:178730634;178730633;178730632 | chr2:179595361;179595360;179595359 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1404382323 | -0.186 | 0.139 | N | 0.256 | 0.175 | 0.340273420219 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
F/L | rs1404382323 | -0.186 | 0.139 | N | 0.256 | 0.175 | 0.340273420219 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/L | rs1404382323 | -0.186 | 0.139 | N | 0.256 | 0.175 | 0.340273420219 | gnomAD-4.0.0 | 1.85932E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54307E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6127 | likely_pathogenic | 0.5825 | pathogenic | -2.167 | Highly Destabilizing | 0.495 | N | 0.333 | neutral | None | None | None | None | N |
F/C | 0.2502 | likely_benign | 0.2631 | benign | -1.281 | Destabilizing | 0.001 | N | 0.275 | neutral | N | 0.46402632 | None | None | N |
F/D | 0.8651 | likely_pathogenic | 0.8666 | pathogenic | -0.931 | Destabilizing | 0.981 | D | 0.591 | neutral | None | None | None | None | N |
F/E | 0.8756 | likely_pathogenic | 0.8772 | pathogenic | -0.803 | Destabilizing | 0.828 | D | 0.591 | neutral | None | None | None | None | N |
F/G | 0.8027 | likely_pathogenic | 0.8025 | pathogenic | -2.543 | Highly Destabilizing | 0.828 | D | 0.492 | neutral | None | None | None | None | N |
F/H | 0.5996 | likely_pathogenic | 0.6118 | pathogenic | -0.827 | Destabilizing | 0.893 | D | 0.486 | neutral | None | None | None | None | N |
F/I | 0.1648 | likely_benign | 0.1522 | benign | -1.017 | Destabilizing | 0.642 | D | 0.354 | neutral | N | 0.361453739 | None | None | N |
F/K | 0.8453 | likely_pathogenic | 0.8558 | pathogenic | -1.305 | Destabilizing | 0.828 | D | 0.563 | neutral | None | None | None | None | N |
F/L | 0.7708 | likely_pathogenic | 0.7781 | pathogenic | -1.017 | Destabilizing | 0.139 | N | 0.256 | neutral | N | 0.417712454 | None | None | N |
F/M | 0.4248 | ambiguous | 0.4057 | ambiguous | -0.827 | Destabilizing | 0.981 | D | 0.449 | neutral | None | None | None | None | N |
F/N | 0.646 | likely_pathogenic | 0.6513 | pathogenic | -1.438 | Destabilizing | 0.944 | D | 0.581 | neutral | None | None | None | None | N |
F/P | 0.9712 | likely_pathogenic | 0.9742 | pathogenic | -1.397 | Destabilizing | 0.981 | D | 0.551 | neutral | None | None | None | None | N |
F/Q | 0.7909 | likely_pathogenic | 0.7935 | pathogenic | -1.432 | Destabilizing | 0.981 | D | 0.542 | neutral | None | None | None | None | N |
F/R | 0.7767 | likely_pathogenic | 0.7748 | pathogenic | -0.773 | Destabilizing | 0.944 | D | 0.578 | neutral | None | None | None | None | N |
F/S | 0.4995 | ambiguous | 0.4731 | ambiguous | -2.275 | Highly Destabilizing | 0.784 | D | 0.441 | neutral | N | 0.451385097 | None | None | N |
F/T | 0.5151 | ambiguous | 0.4749 | ambiguous | -2.045 | Highly Destabilizing | 0.828 | D | 0.444 | neutral | None | None | None | None | N |
F/V | 0.188 | likely_benign | 0.1706 | benign | -1.397 | Destabilizing | 0.425 | N | 0.386 | neutral | N | 0.402201497 | None | None | N |
F/W | 0.4721 | ambiguous | 0.5144 | ambiguous | -0.072 | Destabilizing | 0.944 | D | 0.451 | neutral | None | None | None | None | N |
F/Y | 0.0768 | likely_benign | 0.0938 | benign | -0.355 | Destabilizing | 0.001 | N | 0.068 | neutral | N | 0.421582265 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.