Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5968 | 18127;18128;18129 | chr2:178730631;178730630;178730629 | chr2:179595358;179595357;179595356 |
N2AB | 5651 | 17176;17177;17178 | chr2:178730631;178730630;178730629 | chr2:179595358;179595357;179595356 |
N2A | 4724 | 14395;14396;14397 | chr2:178730631;178730630;178730629 | chr2:179595358;179595357;179595356 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.999 | N | 0.395 | 0.465 | 0.593142052824 | gnomAD-4.0.0 | 1.36854E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31868E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.135 | likely_benign | 0.1331 | benign | -0.648 | Destabilizing | 0.675 | D | 0.235 | neutral | N | 0.497637462 | None | None | N |
S/C | 0.2618 | likely_benign | 0.239 | benign | -0.187 | Destabilizing | 0.999 | D | 0.395 | neutral | N | 0.508409075 | None | None | N |
S/D | 0.7413 | likely_pathogenic | 0.7423 | pathogenic | -0.097 | Destabilizing | 0.969 | D | 0.299 | neutral | None | None | None | None | N |
S/E | 0.8219 | likely_pathogenic | 0.8221 | pathogenic | -0.025 | Destabilizing | 0.969 | D | 0.25 | neutral | None | None | None | None | N |
S/F | 0.3508 | ambiguous | 0.3537 | ambiguous | -0.717 | Destabilizing | 0.976 | D | 0.477 | neutral | N | 0.491532588 | None | None | N |
S/G | 0.2479 | likely_benign | 0.2345 | benign | -0.946 | Destabilizing | 0.969 | D | 0.261 | neutral | None | None | None | None | N |
S/H | 0.4938 | ambiguous | 0.485 | ambiguous | -1.181 | Destabilizing | 0.999 | D | 0.396 | neutral | None | None | None | None | N |
S/I | 0.2944 | likely_benign | 0.297 | benign | 0.063 | Stabilizing | 0.17 | N | 0.302 | neutral | None | None | None | None | N |
S/K | 0.8863 | likely_pathogenic | 0.8936 | pathogenic | -0.263 | Destabilizing | 0.969 | D | 0.238 | neutral | None | None | None | None | N |
S/L | 0.16 | likely_benign | 0.1601 | benign | 0.063 | Stabilizing | 0.02 | N | 0.217 | neutral | None | None | None | None | N |
S/M | 0.3415 | ambiguous | 0.3418 | ambiguous | 0.07 | Stabilizing | 0.982 | D | 0.418 | neutral | None | None | None | None | N |
S/N | 0.3685 | ambiguous | 0.3788 | ambiguous | -0.41 | Destabilizing | 0.969 | D | 0.331 | neutral | None | None | None | None | N |
S/P | 0.9521 | likely_pathogenic | 0.9506 | pathogenic | -0.14 | Destabilizing | 0.996 | D | 0.401 | neutral | N | 0.512675036 | None | None | N |
S/Q | 0.7118 | likely_pathogenic | 0.7134 | pathogenic | -0.368 | Destabilizing | 0.997 | D | 0.366 | neutral | None | None | None | None | N |
S/R | 0.7858 | likely_pathogenic | 0.7892 | pathogenic | -0.305 | Destabilizing | 0.991 | D | 0.401 | neutral | None | None | None | None | N |
S/T | 0.112 | likely_benign | 0.1145 | benign | -0.367 | Destabilizing | 0.061 | N | 0.087 | neutral | N | 0.445245772 | None | None | N |
S/V | 0.2981 | likely_benign | 0.3043 | benign | -0.14 | Destabilizing | 0.759 | D | 0.345 | neutral | None | None | None | None | N |
S/W | 0.5396 | ambiguous | 0.5209 | ambiguous | -0.826 | Destabilizing | 0.999 | D | 0.528 | neutral | None | None | None | None | N |
S/Y | 0.3057 | likely_benign | 0.307 | benign | -0.474 | Destabilizing | 0.996 | D | 0.498 | neutral | N | 0.493013845 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.