Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5969 | 18130;18131;18132 | chr2:178730628;178730627;178730626 | chr2:179595355;179595354;179595353 |
N2AB | 5652 | 17179;17180;17181 | chr2:178730628;178730627;178730626 | chr2:179595355;179595354;179595353 |
N2A | 4725 | 14398;14399;14400 | chr2:178730628;178730627;178730626 | chr2:179595355;179595354;179595353 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs1480885716 | -1.931 | 1.0 | N | 0.811 | 0.48 | 0.762273904298 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 0 | 0 |
F/S | rs1480885716 | -1.931 | 1.0 | N | 0.811 | 0.48 | 0.762273904298 | gnomAD-4.0.0 | 1.59155E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88239E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9548 | likely_pathogenic | 0.9599 | pathogenic | -2.34 | Highly Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
F/C | 0.8001 | likely_pathogenic | 0.7983 | pathogenic | -1.092 | Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.531211318 | None | None | N |
F/D | 0.9889 | likely_pathogenic | 0.99 | pathogenic | -1.29 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
F/E | 0.9877 | likely_pathogenic | 0.9893 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
F/G | 0.9827 | likely_pathogenic | 0.9834 | pathogenic | -2.69 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
F/H | 0.9074 | likely_pathogenic | 0.9152 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
F/I | 0.6298 | likely_pathogenic | 0.6334 | pathogenic | -1.279 | Destabilizing | 1.0 | D | 0.776 | deleterious | N | 0.509854611 | None | None | N |
F/K | 0.984 | likely_pathogenic | 0.9861 | pathogenic | -1.249 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
F/L | 0.9579 | likely_pathogenic | 0.9545 | pathogenic | -1.279 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | N | 0.464698324 | None | None | N |
F/M | 0.8374 | likely_pathogenic | 0.8316 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
F/N | 0.9532 | likely_pathogenic | 0.958 | pathogenic | -1.28 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
F/P | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
F/Q | 0.9661 | likely_pathogenic | 0.9713 | pathogenic | -1.388 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
F/R | 0.9592 | likely_pathogenic | 0.9649 | pathogenic | -0.559 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
F/S | 0.9054 | likely_pathogenic | 0.9153 | pathogenic | -2.067 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.505390153 | None | None | N |
F/T | 0.9265 | likely_pathogenic | 0.9347 | pathogenic | -1.885 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
F/V | 0.6371 | likely_pathogenic | 0.6384 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.50515808 | None | None | N |
F/W | 0.8293 | likely_pathogenic | 0.8156 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
F/Y | 0.3701 | ambiguous | 0.3778 | ambiguous | -0.762 | Destabilizing | 0.999 | D | 0.657 | neutral | N | 0.473605809 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.