Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5972 | 18139;18140;18141 | chr2:178730619;178730618;178730617 | chr2:179595346;179595345;179595344 |
N2AB | 5655 | 17188;17189;17190 | chr2:178730619;178730618;178730617 | chr2:179595346;179595345;179595344 |
N2A | 4728 | 14407;14408;14409 | chr2:178730619;178730618;178730617 | chr2:179595346;179595345;179595344 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1447713863 | None | 0.999 | N | 0.637 | 0.289 | 0.374255764437 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs1447713863 | None | 0.999 | N | 0.637 | 0.289 | 0.374255764437 | gnomAD-4.0.0 | 3.04486E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.61475E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7783 | likely_pathogenic | 0.8268 | pathogenic | -0.879 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
N/C | 0.7701 | likely_pathogenic | 0.8047 | pathogenic | 0.016 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
N/D | 0.4169 | ambiguous | 0.495 | ambiguous | -0.625 | Destabilizing | 0.999 | D | 0.662 | neutral | D | 0.531056602 | None | None | N |
N/E | 0.8911 | likely_pathogenic | 0.9156 | pathogenic | -0.487 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | N |
N/F | 0.9368 | likely_pathogenic | 0.9555 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
N/G | 0.6104 | likely_pathogenic | 0.6716 | pathogenic | -1.261 | Destabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | N |
N/H | 0.3211 | likely_benign | 0.3867 | ambiguous | -0.975 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | N | 0.49916591 | None | None | N |
N/I | 0.8903 | likely_pathogenic | 0.9087 | pathogenic | 0.111 | Stabilizing | 1.0 | D | 0.771 | deleterious | D | 0.52887996 | None | None | N |
N/K | 0.8168 | likely_pathogenic | 0.8553 | pathogenic | -0.279 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.488730976 | None | None | N |
N/L | 0.7986 | likely_pathogenic | 0.8295 | pathogenic | 0.111 | Stabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
N/M | 0.8477 | likely_pathogenic | 0.8716 | pathogenic | 0.501 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
N/P | 0.9661 | likely_pathogenic | 0.97 | pathogenic | -0.188 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
N/Q | 0.7904 | likely_pathogenic | 0.8208 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
N/R | 0.7832 | likely_pathogenic | 0.8206 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
N/S | 0.1836 | likely_benign | 0.2291 | benign | -0.989 | Destabilizing | 0.999 | D | 0.637 | neutral | N | 0.51964753 | None | None | N |
N/T | 0.5582 | ambiguous | 0.6292 | pathogenic | -0.643 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | N | 0.491657492 | None | None | N |
N/V | 0.8803 | likely_pathogenic | 0.902 | pathogenic | -0.188 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
N/W | 0.9766 | likely_pathogenic | 0.9806 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
N/Y | 0.5803 | likely_pathogenic | 0.6759 | pathogenic | -0.113 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.50871179 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.