Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5974 | 18145;18146;18147 | chr2:178730613;178730612;178730611 | chr2:179595340;179595339;179595338 |
N2AB | 5657 | 17194;17195;17196 | chr2:178730613;178730612;178730611 | chr2:179595340;179595339;179595338 |
N2A | 4730 | 14413;14414;14415 | chr2:178730613;178730612;178730611 | chr2:179595340;179595339;179595338 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs761789723 | -1.556 | 1.0 | N | 0.599 | 0.301 | 0.228597637076 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.769 | likely_pathogenic | 0.7349 | pathogenic | -0.629 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
A/D | 0.9953 | likely_pathogenic | 0.9951 | pathogenic | -2.276 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | N | 0.478026331 | None | None | N |
A/E | 0.9921 | likely_pathogenic | 0.9922 | pathogenic | -2.012 | Highly Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
A/F | 0.9497 | likely_pathogenic | 0.9403 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
A/G | 0.5115 | ambiguous | 0.466 | ambiguous | -1.509 | Destabilizing | 1.0 | D | 0.595 | neutral | N | 0.472255362 | None | None | N |
A/H | 0.9898 | likely_pathogenic | 0.9889 | pathogenic | -2.061 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
A/I | 0.7967 | likely_pathogenic | 0.7654 | pathogenic | 0.375 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
A/K | 0.9973 | likely_pathogenic | 0.9974 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
A/L | 0.7565 | likely_pathogenic | 0.7257 | pathogenic | 0.375 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
A/M | 0.8534 | likely_pathogenic | 0.8239 | pathogenic | 0.053 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/N | 0.9812 | likely_pathogenic | 0.9779 | pathogenic | -1.249 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
A/P | 0.9843 | likely_pathogenic | 0.9849 | pathogenic | -0.053 | Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.472999902 | None | None | N |
A/Q | 0.9834 | likely_pathogenic | 0.9834 | pathogenic | -0.904 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/R | 0.9877 | likely_pathogenic | 0.9881 | pathogenic | -1.125 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/S | 0.3938 | ambiguous | 0.3641 | ambiguous | -1.561 | Destabilizing | 1.0 | D | 0.599 | neutral | N | 0.462537013 | None | None | N |
A/T | 0.5625 | ambiguous | 0.5096 | ambiguous | -1.177 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.496265585 | None | None | N |
A/V | 0.509 | ambiguous | 0.4658 | ambiguous | -0.053 | Destabilizing | 1.0 | D | 0.633 | neutral | N | 0.483067001 | None | None | N |
A/W | 0.9963 | likely_pathogenic | 0.9959 | pathogenic | -1.337 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
A/Y | 0.9782 | likely_pathogenic | 0.9759 | pathogenic | -0.805 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.