Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5980 | 18163;18164;18165 | chr2:178730595;178730594;178730593 | chr2:179595322;179595321;179595320 |
N2AB | 5663 | 17212;17213;17214 | chr2:178730595;178730594;178730593 | chr2:179595322;179595321;179595320 |
N2A | 4736 | 14431;14432;14433 | chr2:178730595;178730594;178730593 | chr2:179595322;179595321;179595320 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.065 | N | 0.331 | 0.193 | 0.171388866994 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1813 | likely_benign | 0.1794 | benign | -0.383 | Destabilizing | 0.008 | N | 0.199 | neutral | None | None | None | None | N |
Q/C | 0.4492 | ambiguous | 0.448 | ambiguous | 0.219 | Stabilizing | 0.788 | D | 0.279 | neutral | None | None | None | None | N |
Q/D | 0.1793 | likely_benign | 0.2006 | benign | 0.184 | Stabilizing | None | N | 0.098 | neutral | None | None | None | None | N |
Q/E | 0.0747 | likely_benign | 0.0775 | benign | 0.173 | Stabilizing | None | N | 0.11 | neutral | N | 0.374205953 | None | None | N |
Q/F | 0.4702 | ambiguous | 0.4876 | ambiguous | -0.506 | Destabilizing | 0.138 | N | 0.373 | neutral | None | None | None | None | N |
Q/G | 0.1821 | likely_benign | 0.1888 | benign | -0.597 | Destabilizing | 0.008 | N | 0.253 | neutral | None | None | None | None | N |
Q/H | 0.0987 | likely_benign | 0.1039 | benign | -0.527 | Destabilizing | None | N | 0.144 | neutral | N | 0.430003307 | None | None | N |
Q/I | 0.3785 | ambiguous | 0.4004 | ambiguous | 0.099 | Stabilizing | 0.085 | N | 0.398 | neutral | None | None | None | None | N |
Q/K | 0.082 | likely_benign | 0.0794 | benign | 0.124 | Stabilizing | None | N | 0.091 | neutral | N | 0.391290204 | None | None | N |
Q/L | 0.1164 | likely_benign | 0.1133 | benign | 0.099 | Stabilizing | 0.014 | N | 0.27 | neutral | N | 0.417690158 | None | None | N |
Q/M | 0.3075 | likely_benign | 0.31 | benign | 0.539 | Stabilizing | 0.497 | N | 0.185 | neutral | None | None | None | None | N |
Q/N | 0.1284 | likely_benign | 0.1439 | benign | -0.223 | Destabilizing | None | N | 0.119 | neutral | None | None | None | None | N |
Q/P | 0.2993 | likely_benign | 0.3578 | ambiguous | -0.033 | Destabilizing | 0.065 | N | 0.331 | neutral | N | 0.419151596 | None | None | N |
Q/R | 0.0834 | likely_benign | 0.08 | benign | 0.248 | Stabilizing | None | N | 0.137 | neutral | N | 0.356044267 | None | None | N |
Q/S | 0.1661 | likely_benign | 0.1703 | benign | -0.308 | Destabilizing | 0.008 | N | 0.189 | neutral | None | None | None | None | N |
Q/T | 0.1895 | likely_benign | 0.19 | benign | -0.149 | Destabilizing | 0.018 | N | 0.259 | neutral | None | None | None | None | N |
Q/V | 0.2565 | likely_benign | 0.2564 | benign | -0.033 | Destabilizing | 0.037 | N | 0.309 | neutral | None | None | None | None | N |
Q/W | 0.3799 | ambiguous | 0.4124 | ambiguous | -0.408 | Destabilizing | 0.788 | D | 0.276 | neutral | None | None | None | None | N |
Q/Y | 0.245 | likely_benign | 0.2572 | benign | -0.176 | Destabilizing | 0.022 | N | 0.355 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.