Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5982 | 18169;18170;18171 | chr2:178730589;178730588;178730587 | chr2:179595316;179595315;179595314 |
N2AB | 5665 | 17218;17219;17220 | chr2:178730589;178730588;178730587 | chr2:179595316;179595315;179595314 |
N2A | 4738 | 14437;14438;14439 | chr2:178730589;178730588;178730587 | chr2:179595316;179595315;179595314 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs760854297 | -0.339 | 0.031 | N | 0.159 | 0.11 | 0.279370189704 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/D | rs760854297 | -0.339 | 0.031 | N | 0.159 | 0.11 | 0.279370189704 | gnomAD-4.0.0 | 1.59162E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1572 | likely_benign | 0.1602 | benign | -0.651 | Destabilizing | 0.98 | D | 0.357 | neutral | D | 0.522554549 | None | None | N |
E/C | 0.8483 | likely_pathogenic | 0.8572 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | N |
E/D | 0.1212 | likely_benign | 0.1297 | benign | -0.509 | Destabilizing | 0.031 | N | 0.159 | neutral | N | 0.445960635 | None | None | N |
E/F | 0.7788 | likely_pathogenic | 0.7991 | pathogenic | -0.375 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
E/G | 0.1761 | likely_benign | 0.2016 | benign | -0.904 | Destabilizing | 0.961 | D | 0.381 | neutral | D | 0.528808518 | None | None | N |
E/H | 0.4232 | ambiguous | 0.4228 | ambiguous | -0.331 | Destabilizing | 0.996 | D | 0.37 | neutral | None | None | None | None | N |
E/I | 0.4391 | ambiguous | 0.4665 | ambiguous | 0.004 | Stabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | N |
E/K | 0.1971 | likely_benign | 0.2 | benign | 0.073 | Stabilizing | 0.961 | D | 0.377 | neutral | N | 0.50033105 | None | None | N |
E/L | 0.3859 | ambiguous | 0.4006 | ambiguous | 0.004 | Stabilizing | 0.996 | D | 0.449 | neutral | None | None | None | None | N |
E/M | 0.5071 | ambiguous | 0.5151 | ambiguous | 0.284 | Stabilizing | 1.0 | D | 0.498 | neutral | None | None | None | None | N |
E/N | 0.246 | likely_benign | 0.2564 | benign | -0.341 | Destabilizing | 0.304 | N | 0.237 | neutral | None | None | None | None | N |
E/P | 0.8963 | likely_pathogenic | 0.9235 | pathogenic | -0.193 | Destabilizing | 0.999 | D | 0.36 | neutral | None | None | None | None | N |
E/Q | 0.1325 | likely_benign | 0.127 | benign | -0.276 | Destabilizing | 0.98 | D | 0.401 | neutral | N | 0.460812657 | None | None | N |
E/R | 0.2947 | likely_benign | 0.3029 | benign | 0.295 | Stabilizing | 0.996 | D | 0.366 | neutral | None | None | None | None | N |
E/S | 0.1724 | likely_benign | 0.1853 | benign | -0.539 | Destabilizing | 0.97 | D | 0.337 | neutral | None | None | None | None | N |
E/T | 0.2034 | likely_benign | 0.2077 | benign | -0.328 | Destabilizing | 0.97 | D | 0.389 | neutral | None | None | None | None | N |
E/V | 0.2381 | likely_benign | 0.2523 | benign | -0.193 | Destabilizing | 0.998 | D | 0.413 | neutral | N | 0.511108191 | None | None | N |
E/W | 0.9053 | likely_pathogenic | 0.9183 | pathogenic | -0.15 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/Y | 0.6734 | likely_pathogenic | 0.698 | pathogenic | -0.121 | Destabilizing | 0.999 | D | 0.501 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.