Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5988 | 18187;18188;18189 | chr2:178730571;178730570;178730569 | chr2:179595298;179595297;179595296 |
N2AB | 5671 | 17236;17237;17238 | chr2:178730571;178730570;178730569 | chr2:179595298;179595297;179595296 |
N2A | 4744 | 14455;14456;14457 | chr2:178730571;178730570;178730569 | chr2:179595298;179595297;179595296 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs749765281 | 0.125 | 0.627 | N | 0.556 | 0.167 | 0.438278051908 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 8.69E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 1.65673E-04 |
T/I | rs749765281 | 0.125 | 0.627 | N | 0.556 | 0.167 | 0.438278051908 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 1.30993E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs749765281 | 0.125 | 0.627 | N | 0.556 | 0.167 | 0.438278051908 | gnomAD-4.0.0 | 1.40954E-05 | None | None | None | None | N | None | 0 | 1.35607E-04 | None | 0 | 0 | None | 0 | 0 | 2.3938E-06 | 1.34037E-05 | 2.84527E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0731 | likely_benign | 0.0719 | benign | -0.912 | Destabilizing | 0.09 | N | 0.434 | neutral | D | 0.526381501 | None | None | N |
T/C | 0.3545 | ambiguous | 0.3433 | ambiguous | -0.665 | Destabilizing | 0.944 | D | 0.545 | neutral | None | None | None | None | N |
T/D | 0.2461 | likely_benign | 0.2636 | benign | -1.214 | Destabilizing | 0.241 | N | 0.514 | neutral | None | None | None | None | N |
T/E | 0.2562 | likely_benign | 0.2611 | benign | -1.186 | Destabilizing | 0.241 | N | 0.508 | neutral | None | None | None | None | N |
T/F | 0.1485 | likely_benign | 0.1482 | benign | -1.097 | Destabilizing | 0.818 | D | 0.603 | neutral | None | None | None | None | N |
T/G | 0.2431 | likely_benign | 0.2402 | benign | -1.179 | Destabilizing | 0.116 | N | 0.531 | neutral | None | None | None | None | N |
T/H | 0.1662 | likely_benign | 0.1657 | benign | -1.555 | Destabilizing | 0.818 | D | 0.587 | neutral | None | None | None | None | N |
T/I | 0.087 | likely_benign | 0.0828 | benign | -0.281 | Destabilizing | 0.627 | D | 0.556 | neutral | N | 0.50285128 | None | None | N |
T/K | 0.1494 | likely_benign | 0.1513 | benign | -0.808 | Destabilizing | 0.193 | N | 0.503 | neutral | N | 0.489092549 | None | None | N |
T/L | 0.0781 | likely_benign | 0.0726 | benign | -0.281 | Destabilizing | 0.388 | N | 0.508 | neutral | None | None | None | None | N |
T/M | 0.0845 | likely_benign | 0.079 | benign | 0.196 | Stabilizing | 0.981 | D | 0.551 | neutral | None | None | None | None | N |
T/N | 0.0786 | likely_benign | 0.0828 | benign | -1.002 | Destabilizing | 0.008 | N | 0.262 | neutral | None | None | None | None | N |
T/P | 0.1658 | likely_benign | 0.1426 | benign | -0.46 | Destabilizing | 0.773 | D | 0.555 | neutral | N | 0.499113004 | None | None | N |
T/Q | 0.1761 | likely_benign | 0.1709 | benign | -1.215 | Destabilizing | 0.69 | D | 0.565 | neutral | None | None | None | None | N |
T/R | 0.1244 | likely_benign | 0.1241 | benign | -0.562 | Destabilizing | 0.627 | D | 0.553 | neutral | N | 0.487767185 | None | None | N |
T/S | 0.0875 | likely_benign | 0.0899 | benign | -1.155 | Destabilizing | 0.001 | N | 0.197 | neutral | N | 0.492364928 | None | None | N |
T/V | 0.0891 | likely_benign | 0.0867 | benign | -0.46 | Destabilizing | 0.388 | N | 0.474 | neutral | None | None | None | None | N |
T/W | 0.4308 | ambiguous | 0.4256 | ambiguous | -1.093 | Destabilizing | 0.981 | D | 0.637 | neutral | None | None | None | None | N |
T/Y | 0.1681 | likely_benign | 0.1746 | benign | -0.796 | Destabilizing | 0.932 | D | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.