Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5998 | 18217;18218;18219 | chr2:178730541;178730540;178730539 | chr2:179595268;179595267;179595266 |
N2AB | 5681 | 17266;17267;17268 | chr2:178730541;178730540;178730539 | chr2:179595268;179595267;179595266 |
N2A | 4754 | 14485;14486;14487 | chr2:178730541;178730540;178730539 | chr2:179595268;179595267;179595266 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs757934638 | -0.236 | 1.0 | D | 0.877 | 0.627 | 0.873637900166 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/R | rs757934638 | -0.236 | 1.0 | D | 0.877 | 0.627 | 0.873637900166 | gnomAD-4.0.0 | 1.36888E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99755E-07 | 0 | 1.65733E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.8944 | likely_pathogenic | 0.909 | pathogenic | -0.451 | Destabilizing | 1.0 | D | 0.751 | deleterious | D | 0.596425204 | None | None | I |
G/C | 0.9768 | likely_pathogenic | 0.9812 | pathogenic | -0.754 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
G/D | 0.9741 | likely_pathogenic | 0.9818 | pathogenic | -1.246 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
G/E | 0.9867 | likely_pathogenic | 0.9902 | pathogenic | -1.427 | Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.550616109 | None | None | I |
G/F | 0.993 | likely_pathogenic | 0.9944 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
G/H | 0.9918 | likely_pathogenic | 0.9942 | pathogenic | -0.808 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/I | 0.9939 | likely_pathogenic | 0.9953 | pathogenic | -0.614 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/K | 0.9912 | likely_pathogenic | 0.9935 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
G/L | 0.9918 | likely_pathogenic | 0.9933 | pathogenic | -0.614 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/M | 0.9949 | likely_pathogenic | 0.9957 | pathogenic | -0.422 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/N | 0.9777 | likely_pathogenic | 0.9836 | pathogenic | -0.629 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
G/P | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
G/Q | 0.9824 | likely_pathogenic | 0.9871 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
G/R | 0.9696 | likely_pathogenic | 0.9782 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.628897895 | None | None | I |
G/S | 0.8131 | likely_pathogenic | 0.8512 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
G/T | 0.9763 | likely_pathogenic | 0.981 | pathogenic | -0.788 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/V | 0.9867 | likely_pathogenic | 0.9898 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.654809255 | None | None | I |
G/W | 0.9877 | likely_pathogenic | 0.9917 | pathogenic | -1.437 | Destabilizing | 1.0 | D | 0.819 | deleterious | D | 0.655212863 | None | None | I |
G/Y | 0.9915 | likely_pathogenic | 0.9937 | pathogenic | -1.12 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.