Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5999 | 18220;18221;18222 | chr2:178730538;178730537;178730536 | chr2:179595265;179595264;179595263 |
N2AB | 5682 | 17269;17270;17271 | chr2:178730538;178730537;178730536 | chr2:179595265;179595264;179595263 |
N2A | 4755 | 14488;14489;14490 | chr2:178730538;178730537;178730536 | chr2:179595265;179595264;179595263 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | None | None | 0.159 | N | 0.217 | 0.113 | 0.183819452728 | gnomAD-4.0.0 | 1.59278E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86203E-06 | 0 | 0 |
H/Y | rs1443927165 | 0.952 | 0.866 | N | 0.43 | 0.138 | 0.330069100803 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
H/Y | rs1443927165 | 0.952 | 0.866 | N | 0.43 | 0.138 | 0.330069100803 | gnomAD-4.0.0 | 1.59278E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43365E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1565 | likely_benign | 0.1786 | benign | -0.059 | Destabilizing | 0.003 | N | 0.22 | neutral | None | None | None | None | N |
H/C | 0.1461 | likely_benign | 0.1541 | benign | 0.515 | Stabilizing | 0.968 | D | 0.477 | neutral | None | None | None | None | N |
H/D | 0.1269 | likely_benign | 0.1523 | benign | 0.011 | Stabilizing | 0.302 | N | 0.372 | neutral | N | 0.437434365 | None | None | N |
H/E | 0.1594 | likely_benign | 0.1813 | benign | 0.028 | Stabilizing | 0.111 | N | 0.168 | neutral | None | None | None | None | N |
H/F | 0.2255 | likely_benign | 0.2341 | benign | 0.438 | Stabilizing | 0.896 | D | 0.491 | neutral | None | None | None | None | N |
H/G | 0.1983 | likely_benign | 0.226 | benign | -0.334 | Destabilizing | 0.111 | N | 0.351 | neutral | None | None | None | None | N |
H/I | 0.1969 | likely_benign | 0.2109 | benign | 0.639 | Stabilizing | 0.582 | D | 0.533 | neutral | None | None | None | None | N |
H/K | 0.1184 | likely_benign | 0.1328 | benign | -0.066 | Destabilizing | 0.001 | N | 0.168 | neutral | None | None | None | None | N |
H/L | 0.1032 | likely_benign | 0.1079 | benign | 0.639 | Stabilizing | 0.159 | N | 0.431 | neutral | N | 0.486343033 | None | None | N |
H/M | 0.3111 | likely_benign | 0.319 | benign | 0.559 | Stabilizing | 0.968 | D | 0.469 | neutral | None | None | None | None | N |
H/N | 0.0668 | likely_benign | 0.0764 | benign | 0.083 | Stabilizing | 0.159 | N | 0.217 | neutral | N | 0.4384158 | None | None | N |
H/P | 0.382 | ambiguous | 0.4663 | ambiguous | 0.431 | Stabilizing | 0.468 | N | 0.488 | neutral | N | 0.486516391 | None | None | N |
H/Q | 0.0874 | likely_benign | 0.0948 | benign | 0.146 | Stabilizing | 0.302 | N | 0.335 | neutral | N | 0.430121604 | None | None | N |
H/R | 0.0639 | likely_benign | 0.0693 | benign | -0.473 | Destabilizing | None | N | 0.143 | neutral | N | 0.431335112 | None | None | N |
H/S | 0.1042 | likely_benign | 0.1203 | benign | 0.078 | Stabilizing | 0.003 | N | 0.165 | neutral | None | None | None | None | N |
H/T | 0.1189 | likely_benign | 0.1368 | benign | 0.187 | Stabilizing | 0.003 | N | 0.219 | neutral | None | None | None | None | N |
H/V | 0.1621 | likely_benign | 0.17 | benign | 0.431 | Stabilizing | 0.365 | N | 0.461 | neutral | None | None | None | None | N |
H/W | 0.3362 | likely_benign | 0.3466 | ambiguous | 0.469 | Stabilizing | 0.991 | D | 0.461 | neutral | None | None | None | None | N |
H/Y | 0.0864 | likely_benign | 0.0932 | benign | 0.793 | Stabilizing | 0.866 | D | 0.43 | neutral | N | 0.46783463 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.