Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 60 | 403;404;405 | chr2:178802255;178802254;178802253 | chr2:179666982;179666981;179666980 |
N2AB | 60 | 403;404;405 | chr2:178802255;178802254;178802253 | chr2:179666982;179666981;179666980 |
N2A | 60 | 403;404;405 | chr2:178802255;178802254;178802253 | chr2:179666982;179666981;179666980 |
N2B | 60 | 403;404;405 | chr2:178802255;178802254;178802253 | chr2:179666982;179666981;179666980 |
Novex-1 | 60 | 403;404;405 | chr2:178802255;178802254;178802253 | chr2:179666982;179666981;179666980 |
Novex-2 | 60 | 403;404;405 | chr2:178802255;178802254;178802253 | chr2:179666982;179666981;179666980 |
Novex-3 | 60 | 403;404;405 | chr2:178802255;178802254;178802253 | chr2:179666982;179666981;179666980 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | None | N | 0.266 | 0.087 | 0.132336055621 | gnomAD-4.0.0 | 2.05221E-06 | None | None | None | 0.089(TCAP) | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69788E-06 | 0 | 0 |
D/N | rs35683768 | 0.317 | 0.308 | N | 0.443 | 0.18 | 0.12205267543 | gnomAD-2.1.1 | 1.59E-05 | None | None | None | -1.221(TCAP) | N | None | 0 | 0 | None | 0 | 5.45E-05 | None | 0 | None | 0 | 2.64E-05 | 0 |
D/N | rs35683768 | 0.317 | 0.308 | N | 0.443 | 0.18 | 0.12205267543 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | -1.221(TCAP) | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs35683768 | 0.317 | 0.308 | N | 0.443 | 0.18 | 0.12205267543 | gnomAD-4.0.0 | 1.17724E-05 | None | None | None | -1.221(TCAP) | N | None | 4.00684E-05 | 0 | None | 0 | 2.22876E-05 | None | 0 | 0 | 1.01694E-05 | 2.19592E-05 | 1.60036E-05 |
D/V | rs754533155 | 0.36 | 0.281 | D | 0.526 | 0.356 | 0.451118754121 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | 0.313(TCAP) | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.8E-06 | 0 |
D/V | rs754533155 | 0.36 | 0.281 | D | 0.526 | 0.356 | 0.451118754121 | gnomAD-4.0.0 | 1.59052E-06 | None | None | None | 0.313(TCAP) | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85649E-06 | 0 | 0 |
D/Y | rs35683768 | 0.073 | 0.992 | N | 0.511 | 0.344 | None | gnomAD-2.1.1 | 1.46299E-02 | None | None | None | 0.118(TCAP) | N | None | 6.98038E-02 | 1.13438E-02 | None | 4.82532E-03 | 9.04068E-03 | None | 1.36203E-02 | None | 1.73553E-02 | 6.38423E-03 | 1.16311E-02 |
D/Y | rs35683768 | 0.073 | 0.992 | N | 0.511 | 0.344 | None | gnomAD-3.1.2 | 2.60441E-02 | None | None | None | 0.118(TCAP) | N | None | 6.73579E-02 | 2.57165E-02 | 0 | 4.89631E-03 | 1.04126E-02 | None | 1.82007E-02 | 6.32911E-03 | 5.85053E-03 | 1.34799E-02 | 2.48566E-02 |
D/Y | rs35683768 | 0.073 | 0.992 | N | 0.511 | 0.344 | None | 1000 genomes | 2.89537E-02 | None | None | None | 0.118(TCAP) | N | None | 7.19E-02 | 2.02E-02 | None | None | 1.59E-02 | 8.9E-03 | None | None | None | 1.12E-02 | None |
D/Y | rs35683768 | 0.073 | 0.992 | N | 0.511 | 0.344 | None | gnomAD-4.0.0 | 1.03547E-02 | None | None | None | 0.118(TCAP) | N | None | 6.77265E-02 | 1.55599E-02 | None | 4.86355E-03 | 4.9271E-03 | None | 1.60565E-02 | 1.78277E-02 | 6.06439E-03 | 1.39886E-02 | 1.23184E-02 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2778 | likely_benign | 0.2747 | benign | -0.06 | Destabilizing | 0.081 | N | 0.421 | neutral | N | 0.479981992 | None | -0.031(TCAP) | N |
D/C | 0.9101 | likely_pathogenic | 0.8802 | pathogenic | -0.193 | Destabilizing | 0.847 | D | 0.586 | neutral | None | None | None | -0.046(TCAP) | N |
D/E | 0.2253 | likely_benign | 0.2322 | benign | -0.327 | Destabilizing | None | N | 0.266 | neutral | N | 0.449642912 | None | 0.089(TCAP) | N |
D/F | 0.8617 | likely_pathogenic | 0.8181 | pathogenic | -0.044 | Destabilizing | 0.986 | D | 0.517 | neutral | None | None | None | 0.151(TCAP) | N |
D/G | 0.1865 | likely_benign | 0.1752 | benign | -0.182 | Destabilizing | 0.114 | N | 0.487 | neutral | N | 0.431173787 | None | -0.208(TCAP) | N |
D/H | 0.5179 | ambiguous | 0.4661 | ambiguous | 0.554 | Stabilizing | 0.942 | D | 0.453 | neutral | N | 0.508440468 | None | 0.805(TCAP) | N |
D/I | 0.8049 | likely_pathogenic | 0.7554 | pathogenic | 0.2 | Stabilizing | 0.857 | D | 0.531 | neutral | None | None | None | 0.473(TCAP) | N |
D/K | 0.5677 | likely_pathogenic | 0.5251 | ambiguous | 0.444 | Stabilizing | 0.297 | N | 0.441 | neutral | None | None | None | 0.42(TCAP) | N |
D/L | 0.6922 | likely_pathogenic | 0.6388 | pathogenic | 0.2 | Stabilizing | 0.747 | D | 0.527 | neutral | None | None | None | 0.473(TCAP) | N |
D/M | 0.8537 | likely_pathogenic | 0.8284 | pathogenic | 0.02 | Stabilizing | 0.963 | D | 0.543 | neutral | None | None | None | 0.958(TCAP) | N |
D/N | 0.1088 | likely_benign | 0.1043 | benign | 0.06 | Stabilizing | 0.308 | N | 0.443 | neutral | N | 0.45155417 | None | -1.221(TCAP) | N |
D/P | 0.8703 | likely_pathogenic | 0.848 | pathogenic | 0.132 | Stabilizing | 0.106 | N | 0.455 | neutral | None | None | None | 0.313(TCAP) | N |
D/Q | 0.4496 | ambiguous | 0.4442 | ambiguous | 0.087 | Stabilizing | 0.356 | N | 0.485 | neutral | None | None | None | -0.6(TCAP) | N |
D/R | 0.585 | likely_pathogenic | 0.5308 | ambiguous | 0.685 | Stabilizing | 0.597 | D | 0.451 | neutral | None | None | None | 0.252(TCAP) | N |
D/S | 0.1535 | likely_benign | 0.1505 | benign | 0.005 | Stabilizing | 0.021 | N | 0.297 | neutral | None | None | None | -0.951(TCAP) | N |
D/T | 0.4595 | ambiguous | 0.4338 | ambiguous | 0.116 | Stabilizing | 0.05 | N | 0.439 | neutral | None | None | None | -0.752(TCAP) | N |
D/V | 0.5969 | likely_pathogenic | 0.5396 | ambiguous | 0.132 | Stabilizing | 0.281 | N | 0.526 | neutral | D | 0.532394474 | None | 0.313(TCAP) | N |
D/W | 0.961 | likely_pathogenic | 0.9474 | pathogenic | 0.037 | Stabilizing | 0.986 | D | 0.615 | neutral | None | None | None | -0.027(TCAP) | N |
D/Y | 0.5253 | ambiguous | 0.4045 | ambiguous | 0.188 | Stabilizing | 0.992 | D | 0.511 | neutral | N | 0.489528561 | None | 0.118(TCAP) | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.