Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6002 | 18229;18230;18231 | chr2:178730529;178730528;178730527 | chr2:179595256;179595255;179595254 |
N2AB | 5685 | 17278;17279;17280 | chr2:178730529;178730528;178730527 | chr2:179595256;179595255;179595254 |
N2A | 4758 | 14497;14498;14499 | chr2:178730529;178730528;178730527 | chr2:179595256;179595255;179595254 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/F | rs1415040904 | None | 0.997 | N | 0.768 | 0.409 | 0.836788012211 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
C/F | rs1415040904 | None | 0.997 | N | 0.768 | 0.409 | 0.836788012211 | gnomAD-4.0.0 | 1.86158E-06 | None | None | None | None | N | None | 2.67101E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60416E-05 |
C/Y | None | None | 0.994 | N | 0.777 | 0.432 | 0.806131679925 | gnomAD-4.0.0 | 6.85234E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52385E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.7083 | likely_pathogenic | 0.6531 | pathogenic | -1.758 | Destabilizing | 0.982 | D | 0.641 | neutral | None | None | None | None | N |
C/D | 0.947 | likely_pathogenic | 0.9397 | pathogenic | -0.473 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
C/E | 0.9856 | likely_pathogenic | 0.9858 | pathogenic | -0.365 | Destabilizing | 0.996 | D | 0.807 | deleterious | None | None | None | None | N |
C/F | 0.7524 | likely_pathogenic | 0.75 | pathogenic | -1.139 | Destabilizing | 0.997 | D | 0.768 | deleterious | N | 0.498797062 | None | None | N |
C/G | 0.5291 | ambiguous | 0.4733 | ambiguous | -2.068 | Highly Destabilizing | 0.997 | D | 0.794 | deleterious | N | 0.493365785 | None | None | N |
C/H | 0.9491 | likely_pathogenic | 0.9424 | pathogenic | -2.083 | Highly Destabilizing | 0.323 | N | 0.649 | neutral | None | None | None | None | N |
C/I | 0.8726 | likely_pathogenic | 0.8688 | pathogenic | -0.961 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
C/K | 0.994 | likely_pathogenic | 0.9943 | pathogenic | -0.953 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
C/L | 0.8716 | likely_pathogenic | 0.8658 | pathogenic | -0.961 | Destabilizing | 0.993 | D | 0.682 | prob.neutral | None | None | None | None | N |
C/M | 0.8862 | likely_pathogenic | 0.881 | pathogenic | -0.112 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
C/N | 0.892 | likely_pathogenic | 0.8647 | pathogenic | -0.943 | Destabilizing | 0.996 | D | 0.811 | deleterious | None | None | None | None | N |
C/P | 0.9983 | likely_pathogenic | 0.9984 | pathogenic | -1.201 | Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
C/Q | 0.9682 | likely_pathogenic | 0.9639 | pathogenic | -0.867 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
C/R | 0.9646 | likely_pathogenic | 0.9649 | pathogenic | -0.846 | Destabilizing | 0.997 | D | 0.819 | deleterious | N | 0.488326129 | None | None | N |
C/S | 0.5125 | ambiguous | 0.3905 | ambiguous | -1.497 | Destabilizing | 0.99 | D | 0.737 | prob.delet. | N | 0.498424109 | None | None | N |
C/T | 0.5689 | likely_pathogenic | 0.5088 | ambiguous | -1.207 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
C/V | 0.7352 | likely_pathogenic | 0.7248 | pathogenic | -1.201 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
C/W | 0.9525 | likely_pathogenic | 0.9466 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.491822076 | None | None | N |
C/Y | 0.8886 | likely_pathogenic | 0.883 | pathogenic | -1.107 | Destabilizing | 0.994 | D | 0.777 | deleterious | N | 0.500860977 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.