Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6008 | 18247;18248;18249 | chr2:178730511;178730510;178730509 | chr2:179595238;179595237;179595236 |
N2AB | 5691 | 17296;17297;17298 | chr2:178730511;178730510;178730509 | chr2:179595238;179595237;179595236 |
N2A | 4764 | 14515;14516;14517 | chr2:178730511;178730510;178730509 | chr2:179595238;179595237;179595236 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.543 | D | 0.475 | 0.662 | 0.684920834152 | gnomAD-4.0.0 | 1.38598E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.81741E-06 | 0 | 0 |
V/I | None | None | 0.987 | N | 0.588 | 0.469 | 0.725759869084 | gnomAD-4.0.0 | 1.63982E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.95409E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8865 | likely_pathogenic | 0.8942 | pathogenic | -1.708 | Destabilizing | 0.543 | D | 0.475 | neutral | D | 0.614339371 | None | None | N |
V/C | 0.9859 | likely_pathogenic | 0.9869 | pathogenic | -1.709 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/D | 0.9978 | likely_pathogenic | 0.9982 | pathogenic | -2.029 | Highly Destabilizing | 0.998 | D | 0.721 | prob.delet. | D | 0.652323293 | None | None | N |
V/E | 0.9888 | likely_pathogenic | 0.9904 | pathogenic | -2.001 | Highly Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
V/F | 0.9351 | likely_pathogenic | 0.9436 | pathogenic | -1.427 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | D | 0.65171788 | None | None | N |
V/G | 0.9588 | likely_pathogenic | 0.9656 | pathogenic | -2.02 | Highly Destabilizing | 0.997 | D | 0.693 | prob.neutral | D | 0.652323293 | None | None | N |
V/H | 0.9982 | likely_pathogenic | 0.9985 | pathogenic | -1.412 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/I | 0.0974 | likely_benign | 0.0998 | benign | -0.928 | Destabilizing | 0.987 | D | 0.588 | neutral | N | 0.51875292 | None | None | N |
V/K | 0.9942 | likely_pathogenic | 0.9954 | pathogenic | -1.318 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
V/L | 0.7668 | likely_pathogenic | 0.7576 | pathogenic | -0.928 | Destabilizing | 0.973 | D | 0.581 | neutral | D | 0.617428951 | None | None | N |
V/M | 0.7834 | likely_pathogenic | 0.7794 | pathogenic | -0.978 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/N | 0.9891 | likely_pathogenic | 0.9908 | pathogenic | -1.316 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/P | 0.9858 | likely_pathogenic | 0.9894 | pathogenic | -1.158 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/Q | 0.9897 | likely_pathogenic | 0.9916 | pathogenic | -1.523 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/R | 0.989 | likely_pathogenic | 0.9914 | pathogenic | -0.828 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/S | 0.96 | likely_pathogenic | 0.9667 | pathogenic | -1.871 | Destabilizing | 0.995 | D | 0.652 | neutral | None | None | None | None | N |
V/T | 0.8974 | likely_pathogenic | 0.9078 | pathogenic | -1.734 | Destabilizing | 0.992 | D | 0.649 | neutral | None | None | None | None | N |
V/W | 0.9987 | likely_pathogenic | 0.9989 | pathogenic | -1.573 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/Y | 0.995 | likely_pathogenic | 0.9957 | pathogenic | -1.26 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.