Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6015 | 18268;18269;18270 | chr2:178730357;178730356;178730355 | chr2:179595084;179595083;179595082 |
N2AB | 5698 | 17317;17318;17319 | chr2:178730357;178730356;178730355 | chr2:179595084;179595083;179595082 |
N2A | 4771 | 14536;14537;14538 | chr2:178730357;178730356;178730355 | chr2:179595084;179595083;179595082 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs753892185 | -0.235 | 0.004 | N | 0.203 | 0.037 | 0.141422826196 | gnomAD-2.1.1 | 4.23E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.53E-05 | None | 0 | 0 | 0 |
V/M | rs753892185 | -0.235 | 0.004 | N | 0.203 | 0.037 | 0.141422826196 | gnomAD-4.0.0 | 1.37766E-06 | None | None | None | None | N | None | 3.01296E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.1836E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1544 | likely_benign | 0.1324 | benign | -1.025 | Destabilizing | 0.027 | N | 0.276 | neutral | N | 0.469215057 | None | None | N |
V/C | 0.8 | likely_pathogenic | 0.7142 | pathogenic | -0.674 | Destabilizing | 0.935 | D | 0.336 | neutral | None | None | None | None | N |
V/D | 0.4144 | ambiguous | 0.3666 | ambiguous | -0.596 | Destabilizing | 0.555 | D | 0.424 | neutral | None | None | None | None | N |
V/E | 0.2396 | likely_benign | 0.2054 | benign | -0.592 | Destabilizing | 0.484 | N | 0.416 | neutral | N | 0.478354615 | None | None | N |
V/F | 0.1852 | likely_benign | 0.1534 | benign | -0.711 | Destabilizing | 0.235 | N | 0.387 | neutral | None | None | None | None | N |
V/G | 0.2731 | likely_benign | 0.2386 | benign | -1.307 | Destabilizing | 0.484 | N | 0.413 | neutral | N | 0.460162339 | None | None | N |
V/H | 0.4918 | ambiguous | 0.4281 | ambiguous | -0.644 | Destabilizing | 0.935 | D | 0.393 | neutral | None | None | None | None | N |
V/I | 0.0705 | likely_benign | 0.0707 | benign | -0.365 | Destabilizing | None | N | 0.083 | neutral | None | None | None | None | N |
V/K | 0.2434 | likely_benign | 0.204 | benign | -0.818 | Destabilizing | 0.38 | N | 0.407 | neutral | None | None | None | None | N |
V/L | 0.1266 | likely_benign | 0.1017 | benign | -0.365 | Destabilizing | None | N | 0.059 | neutral | N | 0.412860341 | None | None | N |
V/M | 0.1231 | likely_benign | 0.1093 | benign | -0.379 | Destabilizing | 0.004 | N | 0.203 | neutral | N | 0.498460528 | None | None | N |
V/N | 0.3367 | likely_benign | 0.2994 | benign | -0.715 | Destabilizing | 0.555 | D | 0.405 | neutral | None | None | None | None | N |
V/P | 0.7152 | likely_pathogenic | 0.6168 | pathogenic | -0.55 | Destabilizing | 0.791 | D | 0.41 | neutral | None | None | None | None | N |
V/Q | 0.2264 | likely_benign | 0.1885 | benign | -0.834 | Destabilizing | 0.38 | N | 0.391 | neutral | None | None | None | None | N |
V/R | 0.2066 | likely_benign | 0.1617 | benign | -0.322 | Destabilizing | 0.38 | N | 0.417 | neutral | None | None | None | None | N |
V/S | 0.2017 | likely_benign | 0.1787 | benign | -1.225 | Destabilizing | 0.149 | N | 0.397 | neutral | None | None | None | None | N |
V/T | 0.1257 | likely_benign | 0.1189 | benign | -1.108 | Destabilizing | 0.149 | N | 0.282 | neutral | None | None | None | None | N |
V/W | 0.699 | likely_pathogenic | 0.6044 | pathogenic | -0.892 | Destabilizing | 0.935 | D | 0.448 | neutral | None | None | None | None | N |
V/Y | 0.538 | ambiguous | 0.4562 | ambiguous | -0.576 | Destabilizing | 0.555 | D | 0.369 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.