Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6026 | 18301;18302;18303 | chr2:178730324;178730323;178730322 | chr2:179595051;179595050;179595049 |
N2AB | 5709 | 17350;17351;17352 | chr2:178730324;178730323;178730322 | chr2:179595051;179595050;179595049 |
N2A | 4782 | 14569;14570;14571 | chr2:178730324;178730323;178730322 | chr2:179595051;179595050;179595049 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | None | N | 0.145 | 0.12 | 0.0297737177859 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1303 | likely_benign | 0.1213 | benign | -0.263 | Destabilizing | None | N | 0.197 | neutral | None | None | None | None | N |
N/C | 0.2519 | likely_benign | 0.2219 | benign | 0.403 | Stabilizing | 0.245 | N | 0.493 | neutral | None | None | None | None | N |
N/D | 0.0986 | likely_benign | 0.0984 | benign | 0.076 | Stabilizing | 0.007 | N | 0.367 | neutral | N | 0.435010135 | None | None | N |
N/E | 0.2339 | likely_benign | 0.2289 | benign | 0.028 | Stabilizing | 0.009 | N | 0.349 | neutral | None | None | None | None | N |
N/F | 0.3417 | ambiguous | 0.342 | ambiguous | -0.693 | Destabilizing | 0.138 | N | 0.508 | neutral | None | None | None | None | N |
N/G | 0.1285 | likely_benign | 0.1238 | benign | -0.415 | Destabilizing | None | N | 0.139 | neutral | None | None | None | None | N |
N/H | 0.0913 | likely_benign | 0.0868 | benign | -0.471 | Destabilizing | None | N | 0.167 | neutral | N | 0.502467278 | None | None | N |
N/I | 0.2207 | likely_benign | 0.2056 | benign | 0.048 | Stabilizing | 0.033 | N | 0.521 | neutral | N | 0.521226397 | None | None | N |
N/K | 0.1754 | likely_benign | 0.1709 | benign | 0.142 | Stabilizing | 0.007 | N | 0.343 | neutral | N | 0.468277347 | None | None | N |
N/L | 0.1792 | likely_benign | 0.1722 | benign | 0.048 | Stabilizing | 0.018 | N | 0.459 | neutral | None | None | None | None | N |
N/M | 0.2591 | likely_benign | 0.2521 | benign | 0.383 | Stabilizing | 0.497 | N | 0.483 | neutral | None | None | None | None | N |
N/P | 0.527 | ambiguous | 0.5132 | ambiguous | -0.03 | Destabilizing | 0.044 | N | 0.476 | neutral | None | None | None | None | N |
N/Q | 0.1955 | likely_benign | 0.1861 | benign | -0.267 | Destabilizing | 0.044 | N | 0.336 | neutral | None | None | None | None | N |
N/R | 0.2028 | likely_benign | 0.1866 | benign | 0.212 | Stabilizing | 0.044 | N | 0.309 | neutral | None | None | None | None | N |
N/S | 0.0681 | likely_benign | 0.0653 | benign | -0.017 | Destabilizing | None | N | 0.145 | neutral | N | 0.451577098 | None | None | N |
N/T | 0.114 | likely_benign | 0.1096 | benign | 0.067 | Stabilizing | None | N | 0.152 | neutral | N | 0.50229392 | None | None | N |
N/V | 0.2029 | likely_benign | 0.1865 | benign | -0.03 | Destabilizing | 0.009 | N | 0.456 | neutral | None | None | None | None | N |
N/W | 0.5991 | likely_pathogenic | 0.5874 | pathogenic | -0.714 | Destabilizing | 0.788 | D | 0.485 | neutral | None | None | None | None | N |
N/Y | 0.1236 | likely_benign | 0.125 | benign | -0.434 | Destabilizing | 0.017 | N | 0.484 | neutral | N | 0.521226397 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.