Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6028 | 18307;18308;18309 | chr2:178730318;178730317;178730316 | chr2:179595045;179595044;179595043 |
N2AB | 5711 | 17356;17357;17358 | chr2:178730318;178730317;178730316 | chr2:179595045;179595044;179595043 |
N2A | 4784 | 14575;14576;14577 | chr2:178730318;178730317;178730316 | chr2:179595045;179595044;179595043 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs766799309 | -1.092 | 0.98 | N | 0.533 | 0.269 | 0.388812400583 | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | N | None | 0 | 2.94E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/G | rs766799309 | -1.092 | 0.98 | N | 0.533 | 0.269 | 0.388812400583 | gnomAD-4.0.0 | 2.05599E-06 | None | None | None | None | N | None | 0 | 2.25073E-05 | None | 0 | 0 | None | 0 | 0 | 1.80081E-06 | 0 | 0 |
R/K | rs552189742 | -0.396 | 0.122 | N | 0.163 | 0.128 | 0.130388298395 | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.74E-05 | None | 0 | None | 0 | 0 | 0 |
R/K | rs552189742 | -0.396 | 0.122 | N | 0.163 | 0.128 | 0.130388298395 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 3.85654E-04 | None | 0 | 0 | 0 | 0 | 0 |
R/K | rs552189742 | -0.396 | 0.122 | N | 0.163 | 0.128 | 0.130388298395 | 1000 genomes | 3.99361E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 2E-03 | 0 | None | None | None | 0 | None |
R/K | rs552189742 | -0.396 | 0.122 | N | 0.163 | 0.128 | 0.130388298395 | gnomAD-4.0.0 | 1.31404E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.86548E-04 | None | 0 | 0 | 0 | 0 | 0 |
R/S | rs775372762 | -0.759 | 0.961 | N | 0.523 | 0.279 | 0.204665344411 | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.12E-06 | 0 |
R/T | rs552189742 | None | 0.98 | N | 0.545 | 0.279 | 0.369867359543 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/T | rs552189742 | None | 0.98 | N | 0.545 | 0.279 | 0.369867359543 | gnomAD-4.0.0 | 6.57531E-06 | None | None | None | None | N | None | 2.41569E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2823 | likely_benign | 0.3162 | benign | -0.419 | Destabilizing | 0.931 | D | 0.528 | neutral | None | None | None | None | N |
R/C | 0.2419 | likely_benign | 0.2812 | benign | -0.418 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
R/D | 0.5738 | likely_pathogenic | 0.6222 | pathogenic | 0.078 | Stabilizing | 0.996 | D | 0.531 | neutral | None | None | None | None | N |
R/E | 0.3407 | ambiguous | 0.3724 | ambiguous | 0.204 | Stabilizing | 0.97 | D | 0.494 | neutral | None | None | None | None | N |
R/F | 0.5195 | ambiguous | 0.5716 | pathogenic | -0.261 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
R/G | 0.222 | likely_benign | 0.2485 | benign | -0.723 | Destabilizing | 0.98 | D | 0.533 | neutral | N | 0.493745355 | None | None | N |
R/H | 0.116 | likely_benign | 0.1255 | benign | -1.131 | Destabilizing | 0.999 | D | 0.537 | neutral | None | None | None | None | N |
R/I | 0.238 | likely_benign | 0.2882 | benign | 0.388 | Stabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
R/K | 0.103 | likely_benign | 0.115 | benign | -0.416 | Destabilizing | 0.122 | N | 0.163 | neutral | N | 0.429309874 | None | None | N |
R/L | 0.2213 | likely_benign | 0.2511 | benign | 0.388 | Stabilizing | 0.985 | D | 0.533 | neutral | None | None | None | None | N |
R/M | 0.246 | likely_benign | 0.2813 | benign | -0.093 | Destabilizing | 1.0 | D | 0.589 | neutral | N | 0.498940531 | None | None | N |
R/N | 0.4622 | ambiguous | 0.5306 | ambiguous | -0.031 | Destabilizing | 0.985 | D | 0.518 | neutral | None | None | None | None | N |
R/P | 0.2931 | likely_benign | 0.341 | ambiguous | 0.141 | Stabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | N |
R/Q | 0.1188 | likely_benign | 0.1276 | benign | -0.117 | Destabilizing | 0.97 | D | 0.551 | neutral | None | None | None | None | N |
R/S | 0.3807 | ambiguous | 0.4178 | ambiguous | -0.652 | Destabilizing | 0.961 | D | 0.523 | neutral | N | 0.422381115 | None | None | N |
R/T | 0.1736 | likely_benign | 0.1961 | benign | -0.343 | Destabilizing | 0.98 | D | 0.545 | neutral | N | 0.378918339 | None | None | N |
R/V | 0.2936 | likely_benign | 0.3362 | benign | 0.141 | Stabilizing | 0.996 | D | 0.544 | neutral | None | None | None | None | N |
R/W | 0.1873 | likely_benign | 0.2016 | benign | -0.04 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | N | 0.457008787 | None | None | N |
R/Y | 0.4035 | ambiguous | 0.4517 | ambiguous | 0.28 | Stabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.