Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6030 | 18313;18314;18315 | chr2:178730312;178730311;178730310 | chr2:179595039;179595038;179595037 |
N2AB | 5713 | 17362;17363;17364 | chr2:178730312;178730311;178730310 | chr2:179595039;179595038;179595037 |
N2A | 4786 | 14581;14582;14583 | chr2:178730312;178730311;178730310 | chr2:179595039;179595038;179595037 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.174 | N | 0.577 | 0.139 | 0.0846915920261 | gnomAD-4.0.0 | 1.59729E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86743E-06 | 0 | 0 |
Q/R | rs1560784359 | None | 0.505 | N | 0.595 | 0.146 | 0.0762999501168 | gnomAD-4.0.0 | 6.16735E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.20277E-06 | 0 | 1.65848E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2173 | likely_benign | 0.2256 | benign | -0.564 | Destabilizing | 0.575 | D | 0.592 | neutral | None | None | None | None | N |
Q/C | 0.5487 | ambiguous | 0.5694 | pathogenic | -0.062 | Destabilizing | 0.991 | D | 0.734 | prob.delet. | None | None | None | None | N |
Q/D | 0.3954 | ambiguous | 0.4436 | ambiguous | -0.597 | Destabilizing | 0.575 | D | 0.543 | neutral | None | None | None | None | N |
Q/E | 0.0885 | likely_benign | 0.0949 | benign | -0.517 | Destabilizing | 0.174 | N | 0.577 | neutral | N | 0.427539005 | None | None | N |
Q/F | 0.4593 | ambiguous | 0.4977 | ambiguous | -0.253 | Destabilizing | 0.826 | D | 0.734 | prob.delet. | None | None | None | None | N |
Q/G | 0.321 | likely_benign | 0.3476 | ambiguous | -0.909 | Destabilizing | 0.575 | D | 0.62 | neutral | None | None | None | None | N |
Q/H | 0.1526 | likely_benign | 0.1603 | benign | -0.797 | Destabilizing | 0.003 | N | 0.405 | neutral | N | 0.435851844 | None | None | N |
Q/I | 0.2118 | likely_benign | 0.2261 | benign | 0.305 | Stabilizing | 0.906 | D | 0.733 | prob.delet. | None | None | None | None | N |
Q/K | 0.0971 | likely_benign | 0.1047 | benign | -0.443 | Destabilizing | 0.505 | D | 0.629 | neutral | N | 0.428077723 | None | None | N |
Q/L | 0.0902 | likely_benign | 0.0964 | benign | 0.305 | Stabilizing | 0.505 | D | 0.645 | neutral | N | 0.426192211 | None | None | N |
Q/M | 0.2772 | likely_benign | 0.2877 | benign | 0.682 | Stabilizing | 0.967 | D | 0.626 | neutral | None | None | None | None | N |
Q/N | 0.2639 | likely_benign | 0.2961 | benign | -0.941 | Destabilizing | 0.404 | N | 0.555 | neutral | None | None | None | None | N |
Q/P | 0.2739 | likely_benign | 0.3674 | ambiguous | 0.047 | Stabilizing | 0.879 | D | 0.669 | neutral | N | 0.459780264 | None | None | N |
Q/R | 0.0971 | likely_benign | 0.1007 | benign | -0.362 | Destabilizing | 0.505 | D | 0.595 | neutral | N | 0.410838757 | None | None | N |
Q/S | 0.2271 | likely_benign | 0.2513 | benign | -0.999 | Destabilizing | 0.575 | D | 0.575 | neutral | None | None | None | None | N |
Q/T | 0.1486 | likely_benign | 0.164 | benign | -0.733 | Destabilizing | 0.733 | D | 0.609 | neutral | None | None | None | None | N |
Q/V | 0.1525 | likely_benign | 0.1572 | benign | 0.047 | Stabilizing | 0.906 | D | 0.688 | prob.neutral | None | None | None | None | N |
Q/W | 0.3584 | ambiguous | 0.3852 | ambiguous | -0.141 | Destabilizing | 0.991 | D | 0.723 | prob.delet. | None | None | None | None | N |
Q/Y | 0.3097 | likely_benign | 0.334 | benign | 0.068 | Stabilizing | 0.704 | D | 0.655 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.