Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6031 | 18316;18317;18318 | chr2:178730309;178730308;178730307 | chr2:179595036;179595035;179595034 |
N2AB | 5714 | 17365;17366;17367 | chr2:178730309;178730308;178730307 | chr2:179595036;179595035;179595034 |
N2A | 4787 | 14584;14585;14586 | chr2:178730309;178730308;178730307 | chr2:179595036;179595035;179595034 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs775101958 | -1.647 | 0.001 | N | 0.278 | 0.215 | 0.432604763906 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.32E-05 | None | 0 | 0 | 0 |
L/F | rs775101958 | -1.647 | 0.001 | N | 0.278 | 0.215 | 0.432604763906 | gnomAD-4.0.0 | 1.59601E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4393E-05 | 0 |
L/I | None | None | 0.201 | D | 0.624 | 0.209 | 0.486209434461 | gnomAD-4.0.0 | 4.79587E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.30142E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8454 | likely_pathogenic | 0.8634 | pathogenic | -2.771 | Highly Destabilizing | 0.4 | N | 0.667 | neutral | None | None | None | None | N |
L/C | 0.7119 | likely_pathogenic | 0.729 | pathogenic | -2.074 | Highly Destabilizing | 0.992 | D | 0.762 | deleterious | None | None | None | None | N |
L/D | 0.9878 | likely_pathogenic | 0.9897 | pathogenic | -3.359 | Highly Destabilizing | 0.972 | D | 0.857 | deleterious | None | None | None | None | N |
L/E | 0.9417 | likely_pathogenic | 0.9471 | pathogenic | -3.049 | Highly Destabilizing | 0.92 | D | 0.82 | deleterious | None | None | None | None | N |
L/F | 0.0591 | likely_benign | 0.0579 | benign | -1.613 | Destabilizing | 0.001 | N | 0.278 | neutral | N | 0.465199756 | None | None | N |
L/G | 0.9371 | likely_pathogenic | 0.9422 | pathogenic | -3.398 | Highly Destabilizing | 0.92 | D | 0.815 | deleterious | None | None | None | None | N |
L/H | 0.7501 | likely_pathogenic | 0.757 | pathogenic | -2.979 | Highly Destabilizing | 0.992 | D | 0.849 | deleterious | None | None | None | None | N |
L/I | 0.1402 | likely_benign | 0.1496 | benign | -0.906 | Destabilizing | 0.201 | N | 0.624 | neutral | D | 0.53287281 | None | None | N |
L/K | 0.9008 | likely_pathogenic | 0.9139 | pathogenic | -2.182 | Highly Destabilizing | 0.92 | D | 0.812 | deleterious | None | None | None | None | N |
L/M | 0.115 | likely_benign | 0.1138 | benign | -0.998 | Destabilizing | 0.127 | N | 0.43 | neutral | None | None | None | None | N |
L/N | 0.9431 | likely_pathogenic | 0.9491 | pathogenic | -2.779 | Highly Destabilizing | 0.972 | D | 0.859 | deleterious | None | None | None | None | N |
L/P | 0.9732 | likely_pathogenic | 0.9781 | pathogenic | -1.515 | Destabilizing | 0.972 | D | 0.859 | deleterious | None | None | None | None | N |
L/Q | 0.751 | likely_pathogenic | 0.7641 | pathogenic | -2.484 | Highly Destabilizing | 0.92 | D | 0.841 | deleterious | None | None | None | None | N |
L/R | 0.839 | likely_pathogenic | 0.8534 | pathogenic | -2.12 | Highly Destabilizing | 0.92 | D | 0.833 | deleterious | None | None | None | None | N |
L/S | 0.9294 | likely_pathogenic | 0.9392 | pathogenic | -3.449 | Highly Destabilizing | 0.712 | D | 0.771 | deleterious | D | 0.616844975 | None | None | N |
L/T | 0.878 | likely_pathogenic | 0.8917 | pathogenic | -2.97 | Highly Destabilizing | 0.617 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/V | 0.2177 | likely_benign | 0.2305 | benign | -1.515 | Destabilizing | 0.201 | N | 0.667 | neutral | D | 0.567545706 | None | None | N |
L/W | 0.2691 | likely_benign | 0.2628 | benign | -2.054 | Highly Destabilizing | 0.992 | D | 0.828 | deleterious | None | None | None | None | N |
L/Y | 0.3931 | ambiguous | 0.3769 | ambiguous | -1.788 | Destabilizing | 0.447 | N | 0.681 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.