Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6032 | 18319;18320;18321 | chr2:178730306;178730305;178730304 | chr2:179595033;179595032;179595031 |
N2AB | 5715 | 17368;17369;17370 | chr2:178730306;178730305;178730304 | chr2:179595033;179595032;179595031 |
N2A | 4788 | 14587;14588;14589 | chr2:178730306;178730305;178730304 | chr2:179595033;179595032;179595031 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.122 | N | 0.263 | 0.11 | 0.117506650769 | gnomAD-4.0.0 | 6.85103E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00184E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4187 | ambiguous | 0.4553 | ambiguous | -0.45 | Destabilizing | 0.985 | D | 0.486 | neutral | None | None | None | None | N |
K/C | 0.7526 | likely_pathogenic | 0.7624 | pathogenic | -0.478 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/D | 0.6287 | likely_pathogenic | 0.6681 | pathogenic | 0.143 | Stabilizing | 0.942 | D | 0.477 | neutral | None | None | None | None | N |
K/E | 0.1925 | likely_benign | 0.222 | benign | 0.226 | Stabilizing | 0.961 | D | 0.5 | neutral | N | 0.447323285 | None | None | N |
K/F | 0.7351 | likely_pathogenic | 0.7635 | pathogenic | -0.258 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | N |
K/G | 0.5746 | likely_pathogenic | 0.6056 | pathogenic | -0.781 | Destabilizing | 0.97 | D | 0.549 | neutral | None | None | None | None | N |
K/H | 0.2701 | likely_benign | 0.2691 | benign | -1.076 | Destabilizing | 0.996 | D | 0.667 | neutral | None | None | None | None | N |
K/I | 0.3671 | ambiguous | 0.4 | ambiguous | 0.386 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/L | 0.3853 | ambiguous | 0.4062 | ambiguous | 0.386 | Stabilizing | 0.985 | D | 0.597 | neutral | None | None | None | None | N |
K/M | 0.2475 | likely_benign | 0.2685 | benign | 0.271 | Stabilizing | 1.0 | D | 0.665 | neutral | N | 0.519034241 | None | None | N |
K/N | 0.3992 | ambiguous | 0.4435 | ambiguous | -0.202 | Destabilizing | 0.122 | N | 0.263 | neutral | N | 0.456713559 | None | None | N |
K/P | 0.8659 | likely_pathogenic | 0.8835 | pathogenic | 0.138 | Stabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
K/Q | 0.1354 | likely_benign | 0.1461 | benign | -0.321 | Destabilizing | 0.994 | D | 0.526 | neutral | N | 0.478070266 | None | None | N |
K/R | 0.087 | likely_benign | 0.0871 | benign | -0.411 | Destabilizing | 0.98 | D | 0.479 | neutral | N | 0.46691191 | None | None | N |
K/S | 0.4268 | ambiguous | 0.4703 | ambiguous | -0.894 | Destabilizing | 0.97 | D | 0.472 | neutral | None | None | None | None | N |
K/T | 0.1598 | likely_benign | 0.1802 | benign | -0.611 | Destabilizing | 0.961 | D | 0.509 | neutral | N | 0.444515053 | None | None | N |
K/V | 0.3574 | ambiguous | 0.3828 | ambiguous | 0.138 | Stabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | N |
K/W | 0.7254 | likely_pathogenic | 0.7351 | pathogenic | -0.12 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/Y | 0.5927 | likely_pathogenic | 0.6173 | pathogenic | 0.175 | Stabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.