Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6034 | 18325;18326;18327 | chr2:178730300;178730299;178730298 | chr2:179595027;179595026;179595025 |
N2AB | 5717 | 17374;17375;17376 | chr2:178730300;178730299;178730298 | chr2:179595027;179595026;179595025 |
N2A | 4790 | 14593;14594;14595 | chr2:178730300;178730299;178730298 | chr2:179595027;179595026;179595025 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 1.0 | N | 0.786 | 0.43 | 0.848622260122 | gnomAD-4.0.0 | 6.8506E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.1636E-05 | 0 |
L/P | None | None | 0.999 | N | 0.786 | 0.498 | 0.84006711756 | gnomAD-4.0.0 | 6.8506E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87631E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1394 | likely_benign | 0.1662 | benign | -1.305 | Destabilizing | 0.983 | D | 0.647 | neutral | None | None | None | None | N |
L/C | 0.4448 | ambiguous | 0.4519 | ambiguous | -0.935 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
L/D | 0.5101 | ambiguous | 0.5895 | pathogenic | -0.349 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
L/E | 0.2323 | likely_benign | 0.273 | benign | -0.38 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
L/F | 0.0934 | likely_benign | 0.1068 | benign | -1.042 | Destabilizing | 0.993 | D | 0.757 | deleterious | N | 0.51433771 | None | None | N |
L/G | 0.4471 | ambiguous | 0.488 | ambiguous | -1.566 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
L/H | 0.1265 | likely_benign | 0.1553 | benign | -0.765 | Destabilizing | 1.0 | D | 0.786 | deleterious | N | 0.497752105 | None | None | N |
L/I | 0.064 | likely_benign | 0.0707 | benign | -0.692 | Destabilizing | 0.235 | N | 0.331 | neutral | N | 0.458599071 | None | None | N |
L/K | 0.1403 | likely_benign | 0.1656 | benign | -0.645 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
L/M | 0.0894 | likely_benign | 0.0977 | benign | -0.568 | Destabilizing | 0.995 | D | 0.746 | deleterious | None | None | None | None | N |
L/N | 0.2381 | likely_benign | 0.2891 | benign | -0.453 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
L/P | 0.713 | likely_pathogenic | 0.6512 | pathogenic | -0.864 | Destabilizing | 0.999 | D | 0.786 | deleterious | N | 0.484188162 | None | None | N |
L/Q | 0.0907 | likely_benign | 0.1083 | benign | -0.665 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
L/R | 0.1012 | likely_benign | 0.1159 | benign | -0.116 | Destabilizing | 0.999 | D | 0.799 | deleterious | N | 0.42748673 | None | None | N |
L/S | 0.1461 | likely_benign | 0.1877 | benign | -1.118 | Destabilizing | 0.998 | D | 0.774 | deleterious | None | None | None | None | N |
L/T | 0.1135 | likely_benign | 0.1404 | benign | -1.033 | Destabilizing | 0.995 | D | 0.772 | deleterious | None | None | None | None | N |
L/V | 0.0596 | likely_benign | 0.0667 | benign | -0.864 | Destabilizing | 0.898 | D | 0.582 | neutral | N | 0.441360104 | None | None | N |
L/W | 0.1822 | likely_benign | 0.198 | benign | -1.029 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
L/Y | 0.2433 | likely_benign | 0.2714 | benign | -0.778 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.