Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC603418325;18326;18327 chr2:178730300;178730299;178730298chr2:179595027;179595026;179595025
N2AB571717374;17375;17376 chr2:178730300;178730299;178730298chr2:179595027;179595026;179595025
N2A479014593;14594;14595 chr2:178730300;178730299;178730298chr2:179595027;179595026;179595025
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-44
  • Domain position: 23
  • Structural Position: 34
  • Q(SASA): 0.3347
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/H None None 1.0 N 0.786 0.43 0.848622260122 gnomAD-4.0.0 6.8506E-07 None None None None N None 0 0 None 0 0 None 0 0 0 1.1636E-05 0
L/P None None 0.999 N 0.786 0.498 0.84006711756 gnomAD-4.0.0 6.8506E-07 None None None None N None 0 0 None 0 0 None 1.87631E-05 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1394 likely_benign 0.1662 benign -1.305 Destabilizing 0.983 D 0.647 neutral None None None None N
L/C 0.4448 ambiguous 0.4519 ambiguous -0.935 Destabilizing 1.0 D 0.781 deleterious None None None None N
L/D 0.5101 ambiguous 0.5895 pathogenic -0.349 Destabilizing 0.999 D 0.789 deleterious None None None None N
L/E 0.2323 likely_benign 0.273 benign -0.38 Destabilizing 0.999 D 0.789 deleterious None None None None N
L/F 0.0934 likely_benign 0.1068 benign -1.042 Destabilizing 0.993 D 0.757 deleterious N 0.51433771 None None N
L/G 0.4471 ambiguous 0.488 ambiguous -1.566 Destabilizing 0.999 D 0.773 deleterious None None None None N
L/H 0.1265 likely_benign 0.1553 benign -0.765 Destabilizing 1.0 D 0.786 deleterious N 0.497752105 None None N
L/I 0.064 likely_benign 0.0707 benign -0.692 Destabilizing 0.235 N 0.331 neutral N 0.458599071 None None N
L/K 0.1403 likely_benign 0.1656 benign -0.645 Destabilizing 0.998 D 0.773 deleterious None None None None N
L/M 0.0894 likely_benign 0.0977 benign -0.568 Destabilizing 0.995 D 0.746 deleterious None None None None N
L/N 0.2381 likely_benign 0.2891 benign -0.453 Destabilizing 0.999 D 0.788 deleterious None None None None N
L/P 0.713 likely_pathogenic 0.6512 pathogenic -0.864 Destabilizing 0.999 D 0.786 deleterious N 0.484188162 None None N
L/Q 0.0907 likely_benign 0.1083 benign -0.665 Destabilizing 1.0 D 0.796 deleterious None None None None N
L/R 0.1012 likely_benign 0.1159 benign -0.116 Destabilizing 0.999 D 0.799 deleterious N 0.42748673 None None N
L/S 0.1461 likely_benign 0.1877 benign -1.118 Destabilizing 0.998 D 0.774 deleterious None None None None N
L/T 0.1135 likely_benign 0.1404 benign -1.033 Destabilizing 0.995 D 0.772 deleterious None None None None N
L/V 0.0596 likely_benign 0.0667 benign -0.864 Destabilizing 0.898 D 0.582 neutral N 0.441360104 None None N
L/W 0.1822 likely_benign 0.198 benign -1.029 Destabilizing 1.0 D 0.783 deleterious None None None None N
L/Y 0.2433 likely_benign 0.2714 benign -0.778 Destabilizing 0.999 D 0.813 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.