Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6040 | 18343;18344;18345 | chr2:178730282;178730281;178730280 | chr2:179595009;179595008;179595007 |
N2AB | 5723 | 17392;17393;17394 | chr2:178730282;178730281;178730280 | chr2:179595009;179595008;179595007 |
N2A | 4796 | 14611;14612;14613 | chr2:178730282;178730281;178730280 | chr2:179595009;179595008;179595007 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.681 | 0.469 | 0.516050471323 | gnomAD-4.0.0 | 6.84735E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65815E-05 |
P/T | None | None | 1.0 | D | 0.672 | 0.471 | 0.635285018509 | gnomAD-4.0.0 | 1.36947E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79968E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2291 | likely_benign | 0.203 | benign | -0.202 | Destabilizing | 1.0 | D | 0.66 | neutral | N | 0.486008725 | None | None | I |
P/C | 0.8783 | likely_pathogenic | 0.8325 | pathogenic | -0.316 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
P/D | 0.7053 | likely_pathogenic | 0.6667 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | I |
P/E | 0.5847 | likely_pathogenic | 0.5207 | ambiguous | -0.558 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
P/F | 0.8397 | likely_pathogenic | 0.8253 | pathogenic | -0.729 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
P/G | 0.5689 | likely_pathogenic | 0.5357 | ambiguous | -0.274 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
P/H | 0.5369 | ambiguous | 0.4842 | ambiguous | -0.048 | Destabilizing | 1.0 | D | 0.636 | neutral | D | 0.52991669 | None | None | I |
P/I | 0.6968 | likely_pathogenic | 0.6517 | pathogenic | -0.173 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
P/K | 0.6249 | likely_pathogenic | 0.5521 | ambiguous | -0.184 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
P/L | 0.3865 | ambiguous | 0.3442 | ambiguous | -0.173 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.501176919 | None | None | I |
P/M | 0.6941 | likely_pathogenic | 0.6525 | pathogenic | -0.195 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
P/N | 0.5733 | likely_pathogenic | 0.5369 | ambiguous | 0.207 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
P/Q | 0.4384 | ambiguous | 0.3828 | ambiguous | -0.097 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
P/R | 0.4907 | ambiguous | 0.4245 | ambiguous | 0.302 | Stabilizing | 1.0 | D | 0.666 | neutral | N | 0.489820613 | None | None | I |
P/S | 0.3312 | likely_benign | 0.2988 | benign | -0.037 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.494162253 | None | None | I |
P/T | 0.3096 | likely_benign | 0.2745 | benign | -0.099 | Destabilizing | 1.0 | D | 0.672 | neutral | D | 0.527938939 | None | None | I |
P/V | 0.5238 | ambiguous | 0.4847 | ambiguous | -0.151 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
P/W | 0.9372 | likely_pathogenic | 0.9262 | pathogenic | -0.814 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
P/Y | 0.8173 | likely_pathogenic | 0.7935 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.