Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6061 | 18406;18407;18408 | chr2:178730219;178730218;178730217 | chr2:179594946;179594945;179594944 |
N2AB | 5744 | 17455;17456;17457 | chr2:178730219;178730218;178730217 | chr2:179594946;179594945;179594944 |
N2A | 4817 | 14674;14675;14676 | chr2:178730219;178730218;178730217 | chr2:179594946;179594945;179594944 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/L | rs763108996 | -0.411 | 0.139 | N | 0.295 | 0.247 | 0.547638893815 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.3966 | ambiguous | 0.4394 | ambiguous | -1.252 | Destabilizing | 0.176 | N | 0.304 | neutral | None | None | None | None | N |
W/C | 0.6596 | likely_pathogenic | 0.665 | pathogenic | -0.066 | Destabilizing | 0.975 | D | 0.345 | neutral | N | 0.473683167 | None | None | N |
W/D | 0.6657 | likely_pathogenic | 0.7533 | pathogenic | 1.084 | Stabilizing | 0.704 | D | 0.467 | neutral | None | None | None | None | N |
W/E | 0.581 | likely_pathogenic | 0.6523 | pathogenic | 1.132 | Stabilizing | 0.329 | N | 0.385 | neutral | None | None | None | None | N |
W/F | 0.1957 | likely_benign | 0.2094 | benign | -0.577 | Destabilizing | 0.543 | D | 0.328 | neutral | None | None | None | None | N |
W/G | 0.26 | likely_benign | 0.2924 | benign | -1.426 | Destabilizing | 0.425 | N | 0.348 | neutral | N | 0.454577331 | None | None | N |
W/H | 0.5092 | ambiguous | 0.5362 | ambiguous | -0.047 | Destabilizing | 0.893 | D | 0.367 | neutral | None | None | None | None | N |
W/I | 0.3556 | ambiguous | 0.388 | ambiguous | -0.73 | Destabilizing | 0.031 | N | 0.261 | neutral | None | None | None | None | N |
W/K | 0.5735 | likely_pathogenic | 0.639 | pathogenic | 0.019 | Stabilizing | 0.543 | D | 0.431 | neutral | None | None | None | None | N |
W/L | 0.2727 | likely_benign | 0.2846 | benign | -0.73 | Destabilizing | 0.139 | N | 0.295 | neutral | N | 0.364456759 | None | None | N |
W/M | 0.4422 | ambiguous | 0.4579 | ambiguous | -0.408 | Destabilizing | 0.944 | D | 0.344 | neutral | None | None | None | None | N |
W/N | 0.589 | likely_pathogenic | 0.6506 | pathogenic | -0.187 | Destabilizing | 0.704 | D | 0.459 | neutral | None | None | None | None | N |
W/P | 0.9526 | likely_pathogenic | 0.9661 | pathogenic | -0.9 | Destabilizing | 0.828 | D | 0.449 | neutral | None | None | None | None | N |
W/Q | 0.4977 | ambiguous | 0.5247 | ambiguous | -0.087 | Destabilizing | 0.085 | N | 0.253 | neutral | None | None | None | None | N |
W/R | 0.5142 | ambiguous | 0.5427 | ambiguous | 0.27 | Stabilizing | 0.642 | D | 0.459 | neutral | N | 0.407303459 | None | None | N |
W/S | 0.2542 | likely_benign | 0.2846 | benign | -0.783 | Destabilizing | 0.029 | N | 0.252 | neutral | N | 0.339000954 | None | None | N |
W/T | 0.3166 | likely_benign | 0.3546 | ambiguous | -0.69 | Destabilizing | 0.013 | N | 0.185 | neutral | None | None | None | None | N |
W/V | 0.3364 | likely_benign | 0.3507 | ambiguous | -0.9 | Destabilizing | 0.013 | N | 0.243 | neutral | None | None | None | None | N |
W/Y | 0.3527 | ambiguous | 0.3707 | ambiguous | -0.63 | Destabilizing | 0.007 | N | 0.164 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.