Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6062 | 18409;18410;18411 | chr2:178730216;178730215;178730214 | chr2:179594943;179594942;179594941 |
N2AB | 5745 | 17458;17459;17460 | chr2:178730216;178730215;178730214 | chr2:179594943;179594942;179594941 |
N2A | 4818 | 14677;14678;14679 | chr2:178730216;178730215;178730214 | chr2:179594943;179594942;179594941 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs56050216 | None | 0.968 | N | 0.657 | 0.236 | 0.184867976434 | gnomAD-4.0.0 | 1.592E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85915E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4801 | ambiguous | 0.5609 | ambiguous | -0.684 | Destabilizing | 0.919 | D | 0.618 | neutral | None | None | None | None | N |
K/C | 0.8408 | likely_pathogenic | 0.8601 | pathogenic | -0.541 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
K/D | 0.7128 | likely_pathogenic | 0.7891 | pathogenic | 0.206 | Stabilizing | 0.988 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/E | 0.2106 | likely_benign | 0.2847 | benign | 0.327 | Stabilizing | 0.896 | D | 0.582 | neutral | N | 0.500349693 | None | None | N |
K/F | 0.8282 | likely_pathogenic | 0.8672 | pathogenic | -0.349 | Destabilizing | 0.076 | N | 0.515 | neutral | None | None | None | None | N |
K/G | 0.6153 | likely_pathogenic | 0.6833 | pathogenic | -1.04 | Destabilizing | 0.959 | D | 0.749 | deleterious | None | None | None | None | N |
K/H | 0.4036 | ambiguous | 0.4467 | ambiguous | -1.218 | Destabilizing | 0.997 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/I | 0.4424 | ambiguous | 0.5256 | ambiguous | 0.238 | Stabilizing | 0.952 | D | 0.764 | deleterious | None | None | None | None | N |
K/L | 0.4436 | ambiguous | 0.5135 | ambiguous | 0.238 | Stabilizing | 0.662 | D | 0.672 | neutral | None | None | None | None | N |
K/M | 0.2688 | likely_benign | 0.3226 | benign | 0.04 | Stabilizing | 0.64 | D | 0.513 | neutral | N | 0.49051863 | None | None | N |
K/N | 0.477 | ambiguous | 0.5652 | pathogenic | -0.325 | Destabilizing | 0.968 | D | 0.657 | neutral | N | 0.508334458 | None | None | N |
K/P | 0.9059 | likely_pathogenic | 0.9227 | pathogenic | -0.04 | Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/Q | 0.1493 | likely_benign | 0.1828 | benign | -0.343 | Destabilizing | 0.968 | D | 0.669 | neutral | N | 0.509931968 | None | None | N |
K/R | 0.1015 | likely_benign | 0.1049 | benign | -0.42 | Destabilizing | 0.059 | N | 0.303 | neutral | N | 0.489095336 | None | None | N |
K/S | 0.4995 | ambiguous | 0.5969 | pathogenic | -1.036 | Destabilizing | 0.919 | D | 0.611 | neutral | None | None | None | None | N |
K/T | 0.2435 | likely_benign | 0.2906 | benign | -0.702 | Destabilizing | 0.896 | D | 0.699 | prob.neutral | N | 0.517916733 | None | None | N |
K/V | 0.4259 | ambiguous | 0.501 | ambiguous | -0.04 | Destabilizing | 0.851 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/W | 0.803 | likely_pathogenic | 0.8324 | pathogenic | -0.209 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
K/Y | 0.692 | likely_pathogenic | 0.7405 | pathogenic | 0.057 | Stabilizing | 0.952 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.