Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6063 | 18412;18413;18414 | chr2:178730213;178730212;178730211 | chr2:179594940;179594939;179594938 |
N2AB | 5746 | 17461;17462;17463 | chr2:178730213;178730212;178730211 | chr2:179594940;179594939;179594938 |
N2A | 4819 | 14680;14681;14682 | chr2:178730213;178730212;178730211 | chr2:179594940;179594939;179594938 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.992 | N | 0.659 | 0.535 | 0.366848117066 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3542 | ambiguous | 0.4093 | ambiguous | -0.652 | Destabilizing | 0.999 | D | 0.674 | neutral | N | 0.519802245 | None | None | N |
D/C | 0.8738 | likely_pathogenic | 0.8965 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/E | 0.2709 | likely_benign | 0.3067 | benign | -0.416 | Destabilizing | 0.992 | D | 0.404 | neutral | N | 0.426582653 | None | None | N |
D/F | 0.8193 | likely_pathogenic | 0.8542 | pathogenic | -0.09 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
D/G | 0.2096 | likely_benign | 0.2604 | benign | -0.965 | Destabilizing | 0.992 | D | 0.659 | neutral | N | 0.504507506 | None | None | N |
D/H | 0.5877 | likely_pathogenic | 0.6357 | pathogenic | -0.084 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.509294448 | None | None | N |
D/I | 0.7247 | likely_pathogenic | 0.759 | pathogenic | 0.171 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
D/K | 0.6442 | likely_pathogenic | 0.7003 | pathogenic | -0.075 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
D/L | 0.6613 | likely_pathogenic | 0.6924 | pathogenic | 0.171 | Stabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | N |
D/M | 0.8034 | likely_pathogenic | 0.8281 | pathogenic | 0.494 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/N | 0.1435 | likely_benign | 0.161 | benign | -0.683 | Destabilizing | 0.79 | D | 0.295 | neutral | N | 0.494770515 | None | None | N |
D/P | 0.9336 | likely_pathogenic | 0.9518 | pathogenic | -0.08 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
D/Q | 0.614 | likely_pathogenic | 0.6573 | pathogenic | -0.545 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/R | 0.7023 | likely_pathogenic | 0.7418 | pathogenic | 0.213 | Stabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
D/S | 0.2218 | likely_benign | 0.2594 | benign | -0.855 | Destabilizing | 0.994 | D | 0.602 | neutral | None | None | None | None | N |
D/T | 0.3664 | ambiguous | 0.4128 | ambiguous | -0.585 | Destabilizing | 0.998 | D | 0.722 | prob.delet. | None | None | None | None | N |
D/V | 0.4834 | ambiguous | 0.5255 | ambiguous | -0.08 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | N | 0.489922745 | None | None | N |
D/W | 0.9533 | likely_pathogenic | 0.9604 | pathogenic | 0.212 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
D/Y | 0.4709 | ambiguous | 0.5149 | ambiguous | 0.186 | Stabilizing | 1.0 | D | 0.727 | prob.delet. | N | 0.498191632 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.