Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6064 | 18415;18416;18417 | chr2:178730210;178730209;178730208 | chr2:179594937;179594936;179594935 |
N2AB | 5747 | 17464;17465;17466 | chr2:178730210;178730209;178730208 | chr2:179594937;179594936;179594935 |
N2A | 4820 | 14683;14684;14685 | chr2:178730210;178730209;178730208 | chr2:179594937;179594936;179594935 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs750822862 | -0.317 | 0.901 | N | 0.55 | 0.189 | 0.156986980423 | gnomAD-2.1.1 | 7.15E-06 | None | None | None | None | N | None | 4.14E-05 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
D/H | rs750822862 | -0.317 | 0.901 | N | 0.55 | 0.189 | 0.156986980423 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/H | rs750822862 | -0.317 | 0.901 | N | 0.55 | 0.189 | 0.156986980423 | gnomAD-4.0.0 | 3.8449E-06 | None | None | None | None | N | None | 3.38375E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.3403E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1349 | likely_benign | 0.1353 | benign | 0.012 | Stabilizing | 0.722 | D | 0.487 | neutral | N | 0.447186346 | None | None | N |
D/C | 0.6089 | likely_pathogenic | 0.5936 | pathogenic | 0.333 | Stabilizing | 0.996 | D | 0.661 | neutral | None | None | None | None | N |
D/E | 0.1169 | likely_benign | 0.1213 | benign | -0.122 | Destabilizing | 0.008 | N | 0.116 | neutral | N | 0.459710139 | None | None | N |
D/F | 0.5233 | ambiguous | 0.5164 | ambiguous | -0.167 | Destabilizing | 0.987 | D | 0.607 | neutral | None | None | None | None | N |
D/G | 0.115 | likely_benign | 0.1176 | benign | -0.145 | Destabilizing | 0.565 | D | 0.474 | neutral | N | 0.433616829 | None | None | N |
D/H | 0.2402 | likely_benign | 0.2397 | benign | -0.008 | Destabilizing | 0.901 | D | 0.55 | neutral | N | 0.509658957 | None | None | N |
D/I | 0.3 | likely_benign | 0.2799 | benign | 0.362 | Stabilizing | 0.961 | D | 0.597 | neutral | None | None | None | None | N |
D/K | 0.2663 | likely_benign | 0.2761 | benign | 0.548 | Stabilizing | 0.633 | D | 0.476 | neutral | None | None | None | None | N |
D/L | 0.3345 | likely_benign | 0.3308 | benign | 0.362 | Stabilizing | 0.923 | D | 0.568 | neutral | None | None | None | None | N |
D/M | 0.5049 | ambiguous | 0.5019 | ambiguous | 0.474 | Stabilizing | 0.996 | D | 0.611 | neutral | None | None | None | None | N |
D/N | 0.0748 | likely_benign | 0.0735 | benign | 0.444 | Stabilizing | 0.003 | N | 0.115 | neutral | N | 0.452245449 | None | None | N |
D/P | 0.5177 | ambiguous | 0.5392 | ambiguous | 0.268 | Stabilizing | 0.961 | D | 0.545 | neutral | None | None | None | None | N |
D/Q | 0.2506 | likely_benign | 0.2636 | benign | 0.45 | Stabilizing | 0.858 | D | 0.452 | neutral | None | None | None | None | N |
D/R | 0.3089 | likely_benign | 0.3214 | benign | 0.598 | Stabilizing | 0.923 | D | 0.542 | neutral | None | None | None | None | N |
D/S | 0.0939 | likely_benign | 0.096 | benign | 0.321 | Stabilizing | 0.633 | D | 0.411 | neutral | None | None | None | None | N |
D/T | 0.1875 | likely_benign | 0.1851 | benign | 0.436 | Stabilizing | 0.775 | D | 0.511 | neutral | None | None | None | None | N |
D/V | 0.2036 | likely_benign | 0.1906 | benign | 0.268 | Stabilizing | 0.949 | D | 0.592 | neutral | N | 0.493574783 | None | None | N |
D/W | 0.8587 | likely_pathogenic | 0.8579 | pathogenic | -0.151 | Destabilizing | 0.996 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/Y | 0.2342 | likely_benign | 0.2284 | benign | 0.052 | Stabilizing | 0.983 | D | 0.61 | neutral | N | 0.456492263 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.