Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6067 | 18424;18425;18426 | chr2:178730201;178730200;178730199 | chr2:179594928;179594927;179594926 |
N2AB | 5750 | 17473;17474;17475 | chr2:178730201;178730200;178730199 | chr2:179594928;179594927;179594926 |
N2A | 4823 | 14692;14693;14694 | chr2:178730201;178730200;178730199 | chr2:179594928;179594927;179594926 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.896 | N | 0.812 | 0.112 | 0.236890367714 | gnomAD-4.0.0 | 1.59199E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85905E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0693 | likely_benign | 0.0695 | benign | -1.344 | Destabilizing | 0.007 | N | 0.449 | neutral | N | 0.428232439 | None | None | N |
T/C | 0.2827 | likely_benign | 0.2932 | benign | -0.616 | Destabilizing | 0.992 | D | 0.772 | deleterious | None | None | None | None | N |
T/D | 0.7497 | likely_pathogenic | 0.8216 | pathogenic | -1.675 | Destabilizing | 0.617 | D | 0.792 | deleterious | None | None | None | None | N |
T/E | 0.7355 | likely_pathogenic | 0.8151 | pathogenic | -1.389 | Destabilizing | 0.617 | D | 0.795 | deleterious | None | None | None | None | N |
T/F | 0.2849 | likely_benign | 0.3791 | ambiguous | -0.904 | Destabilizing | 0.92 | D | 0.813 | deleterious | None | None | None | None | N |
T/G | 0.2695 | likely_benign | 0.274 | benign | -1.791 | Destabilizing | 0.25 | N | 0.743 | deleterious | None | None | None | None | N |
T/H | 0.4609 | ambiguous | 0.5202 | ambiguous | -1.631 | Destabilizing | 0.977 | D | 0.78 | deleterious | None | None | None | None | N |
T/I | 0.2209 | likely_benign | 0.2992 | benign | -0.119 | Destabilizing | 0.896 | D | 0.812 | deleterious | N | 0.462307727 | None | None | N |
T/K | 0.7119 | likely_pathogenic | 0.7941 | pathogenic | 0.031 | Stabilizing | 0.447 | N | 0.792 | deleterious | None | None | None | None | N |
T/L | 0.1531 | likely_benign | 0.1901 | benign | -0.119 | Destabilizing | 0.617 | D | 0.78 | deleterious | None | None | None | None | N |
T/M | 0.1343 | likely_benign | 0.1622 | benign | -0.296 | Destabilizing | 0.972 | D | 0.783 | deleterious | None | None | None | None | N |
T/N | 0.2906 | likely_benign | 0.3485 | ambiguous | -0.917 | Destabilizing | 0.379 | N | 0.739 | prob.delet. | N | 0.448359782 | None | None | N |
T/P | 0.5812 | likely_pathogenic | 0.6217 | pathogenic | -0.502 | Destabilizing | 0.896 | D | 0.813 | deleterious | N | 0.45842206 | None | None | N |
T/Q | 0.5595 | ambiguous | 0.6385 | pathogenic | -0.524 | Destabilizing | 0.85 | D | 0.816 | deleterious | None | None | None | None | N |
T/R | 0.5886 | likely_pathogenic | 0.6798 | pathogenic | -0.442 | Destabilizing | 0.85 | D | 0.819 | deleterious | None | None | None | None | N |
T/S | 0.1108 | likely_benign | 0.1098 | benign | -1.18 | Destabilizing | 0.007 | N | 0.401 | neutral | N | 0.361180727 | None | None | N |
T/V | 0.149 | likely_benign | 0.1845 | benign | -0.502 | Destabilizing | 0.617 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/W | 0.72 | likely_pathogenic | 0.7875 | pathogenic | -1.077 | Destabilizing | 0.992 | D | 0.785 | deleterious | None | None | None | None | N |
T/Y | 0.3344 | likely_benign | 0.4239 | ambiguous | -0.679 | Destabilizing | 0.972 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.