Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6075 | 18448;18449;18450 | chr2:178730177;178730176;178730175 | chr2:179594904;179594903;179594902 |
N2AB | 5758 | 17497;17498;17499 | chr2:178730177;178730176;178730175 | chr2:179594904;179594903;179594902 |
N2A | 4831 | 14716;14717;14718 | chr2:178730177;178730176;178730175 | chr2:179594904;179594903;179594902 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.997 | N | 0.665 | 0.389 | 0.510230903827 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.326 | likely_benign | 0.3243 | benign | -0.054 | Destabilizing | 0.983 | D | 0.532 | neutral | None | None | None | None | N |
K/C | 0.7811 | likely_pathogenic | 0.7873 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
K/D | 0.5069 | ambiguous | 0.5606 | ambiguous | 0.13 | Stabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/E | 0.1628 | likely_benign | 0.1777 | benign | 0.15 | Stabilizing | 0.977 | D | 0.481 | neutral | N | 0.514817713 | None | None | N |
K/F | 0.7752 | likely_pathogenic | 0.7908 | pathogenic | -0.177 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
K/G | 0.3769 | ambiguous | 0.3813 | ambiguous | -0.302 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | N |
K/H | 0.3365 | likely_benign | 0.3558 | ambiguous | -0.696 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/I | 0.4561 | ambiguous | 0.4747 | ambiguous | 0.532 | Stabilizing | 0.997 | D | 0.776 | deleterious | N | 0.499041006 | None | None | N |
K/L | 0.4079 | ambiguous | 0.4217 | ambiguous | 0.532 | Stabilizing | 0.995 | D | 0.641 | neutral | None | None | None | None | N |
K/M | 0.2895 | likely_benign | 0.3013 | benign | 0.484 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/N | 0.3553 | ambiguous | 0.4012 | ambiguous | 0.296 | Stabilizing | 0.993 | D | 0.682 | prob.neutral | N | 0.4854922 | None | None | N |
K/P | 0.842 | likely_pathogenic | 0.8416 | pathogenic | 0.366 | Stabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
K/Q | 0.1363 | likely_benign | 0.142 | benign | 0.091 | Stabilizing | 0.993 | D | 0.665 | neutral | N | 0.479051701 | None | None | N |
K/R | 0.088 | likely_benign | 0.0877 | benign | -0.048 | Destabilizing | 0.235 | N | 0.295 | neutral | N | 0.498312252 | None | None | N |
K/S | 0.3429 | ambiguous | 0.3648 | ambiguous | -0.256 | Destabilizing | 0.983 | D | 0.595 | neutral | None | None | None | None | N |
K/T | 0.1691 | likely_benign | 0.1749 | benign | -0.072 | Destabilizing | 0.997 | D | 0.665 | neutral | N | 0.49034613 | None | None | N |
K/V | 0.3733 | ambiguous | 0.3767 | ambiguous | 0.366 | Stabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/W | 0.8084 | likely_pathogenic | 0.8161 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
K/Y | 0.6828 | likely_pathogenic | 0.7099 | pathogenic | 0.21 | Stabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.